LOCUS       VTR91758.1               714 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana sigma-70 family rna polymerase sigma
            factor : RNA polymerase sigma factor, sigma-70 family
            OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
            18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1: Sigma70_r2:
            Sigma70_r4_2: DUF4177: Secretin_N protein.
ACCESSION   LR593886-1059
PROTEIN_ID  VTR91758.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_59560"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ;
                     ALN/Q_length_ratio=0.289 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_5383 PE=4 SV=1 ; EVALUE=6e-41 ;
                     Q/S_length_ratio=2.238"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|L0DGG0|L0DGG0_SINAD ;
                     ALN/Q_length_ratio=0.555 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4264 PE=4 SV=1 ; EVALUE=4e-40 ;
                     Q/S_length_ratio=1.684"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|L0DFV7|L0DFV7_SINAD ;
                     ALN/Q_length_ratio=0.254 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3442 PE=4 SV=1 ; EVALUE=2e-37 ;
                     Q/S_length_ratio=0.582"
                     /note="BLAST_uniprot:hit_4 ;
                     ACCESSION=tr|L0DDR3|L0DDR3_SINAD ;
                     ALN/Q_length_ratio=0.427 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_2497 PE=4 SV=1 ; EVALUE=4e-36 ;
                     Q/S_length_ratio=0.648"
                     /note="BLAST_uniprot:hit_5 ;
                     ACCESSION=tr|L0D6V6|L0D6V6_SINAD ;
                     ALN/Q_length_ratio=0.255 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0102 PE=4 SV=1 ; EVALUE=5e-36 ;
                     Q/S_length_ratio=1.275"
                     /note="BLAST_uniprot:hit_6 ;
                     ACCESSION=tr|L0DPR4|L0DPR4_SINAD ;
                     ALN/Q_length_ratio=0.262 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_6601 PE=4 SV=1 ; EVALUE=9e-36 ;
                     Q/S_length_ratio=1.178"
                     /note="BLAST_uniprot:hit_7 ;
                     ACCESSION=tr|L0DIU5|L0DIU5_SINAD ;
                     ALN/Q_length_ratio=0.347 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4592 PE=4 SV=1 ; EVALUE=1e-34 ;
                     Q/S_length_ratio=1.248"
                     /note="BLAST_uniprot:hit_8 ;
                     ACCESSION=tr|L0DHB8|L0DHB8_SINAD ;
                     ALN/Q_length_ratio=0.375 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3834 PE=4 SV=1 ; EVALUE=6e-34 ;
                     Q/S_length_ratio=1.289"
                     /note="BLAST_uniprot:hit_10 ;
                     ACCESSION=tr|L0DR85|L0DR85_SINAD ;
                     ALN/Q_length_ratio=0.319 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-33 ;
                     Q/S_length_ratio=1.196"
                     /note="BLAST_uniprot:hit_9 ;
                     ACCESSION=tr|L0DM90|L0DM90_SINAD ;
                     ALN/Q_length_ratio=0.353 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-33 ;
                     Q/S_length_ratio=1.163"
                     /note="BLAST_uniprot:hit_11 ;
                     ACCESSION=tr|L0DA12|L0DA12_SINAD ;
                     ALN/Q_length_ratio=0.367 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_1318 PE=4 SV=1 ; EVALUE=3e-33 ;
                     Q/S_length_ratio=0.986"
                     /note="BLAST_uniprot:hit_12 ;
                     ACCESSION=tr|L0DIK4|L0DIK4_SINAD ;
                     ALN/Q_length_ratio=0.259 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4459 PE=4 SV=1 ; EVALUE=1e-32 ;
                     Q/S_length_ratio=0.729"
                     /note="BLAST_uniprot:hit_14 ;
                     ACCESSION=tr|L0D7L2|L0D7L2_SINAD ;
                     ALN/Q_length_ratio=0.294 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0185 PE=4 SV=1 ; EVALUE=2e-32 ;
                     Q/S_length_ratio=1.425"
                     /note="BLAST_uniprot:hit_13 ;
                     ACCESSION=tr|L0DHG5|L0DHG5_SINAD ;
                     ALN/Q_length_ratio=0.389 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3888 PE=4 SV=1 ; EVALUE=2e-32 ;
                     Q/S_length_ratio=1.017"
                     /note="BLAST_uniprot:hit_15 ;
                     ACCESSION=tr|L0DQE6|L0DQE6_SINAD ;
                     ALN/Q_length_ratio=0.248 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7079 PE=4 SV=1 ; EVALUE=4e-32 ;
                     Q/S_length_ratio=0.749"
                     /note="Pfam_scan:hit_1 (37..106);
                     Pfam:PF04542.9:Sigma70_r2;
                     Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71;
                     EVALUE:3.9e-13; BITSCORE: 48.7"
                     /note="Pfam_scan:hit_2 (131..183);
                     Pfam:PF08281.7:Sigma70_r4_2;
                     Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54;
                     EVALUE:1.1e-10; BITSCORE: 40.7"
                     /note="Pfam_scan:hit_3 (340..387); Pfam:PF13783.1:DUF4177;
                     Pfam_type:Family;HMM_aln_Length:57; HMM_Length:61;
                     EVALUE:1.2e-06; BITSCORE: 28.0"
                     /note="Pfam_scan:hit_4 (652..710);
                     Pfam:PF03958.12:Secretin_N;
                     Pfam_type:Domain;HMM_aln_Length:76; HMM_Length:82;
                     EVALUE:3.7e-13; BITSCORE: 49.4"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0001071"
                     /note="GO_domain:GO:0000988"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
                     /note="GO_domain:GO:0043234"
                     /note="GO_domain:GO:0005622"
BEGIN
        1 MTTLLHAVAR RAEAITPDAD LLARFTRDRD HAAFEELVRR HGPLVWAVCR HMLPDHADAE
       61 DAFQAVFLAL VRSAATIRDG RTVPAWLHGV AVRVATRAKR SGARRRQREQ IASHAESERP
      121 VASASWDALV RSVHEEVQQL PEVERTAFVM CDLEGVSQPD AAARLGWPLG SLSGRLCKAR
      181 QRLMERLSAR GVAPAVAIGI GVTASTTGAV PGRLFNVVRA FPSTPTAASK AASVLARGFT
      241 EGITMRVKLM VASVVITTLG LTSGAALLSK ADAQPPGGGT GTGSSSGTSA TTTGGSTSTG
      301 SSGSSTTTSS TSSADDSGTN SGTTASSNGS GRTNTAPSPA WEYKFVDVRS DRKAFESAIT
      361 QHGKDGWEFC SSERFGPAEL VLVFKKSKGG ASGFNPFGGF GGGGGGSFGG GGVGQPGGGG
      421 FPGGGGVGGG GGFPGGGGFG GSGSNFPGGG GGSGGFGGNF GGGGGTSGGP GGGGNRGASA
      481 DPERSWAMLQ RLTNSTGDTV DLGAIPPQTR DFLKSMTERT GGVPLPEKGT MTKAEYLKYH
      541 ARSEAARGAA PGGSGGSGNS SAGGLHGSSS SDSAAVALKN ASADGVVKVI QKEFEKKGLR
      601 IAAERTTNAV LIVASAPDDL KSALKRIAEL DAPAAPRVSG GSGTPGKPDA FVNVFTLKHA
      661 KAEELVTVLQ KLFPNGTMTA DARTNSIVLS GDTETLDTAR ALIARLDMEV VKPK
//