LOCUS VTR91758.1 714 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: DUF4177: Secretin_N protein. ACCESSION LR593886-1059 PROTEIN_ID VTR91758.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_59560" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.289 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=6e-41 ; Q/S_length_ratio=2.238" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.555 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=4e-40 ; Q/S_length_ratio=1.684" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.254 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.582" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.427 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=0.648" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.255 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=5e-36 ; Q/S_length_ratio=1.275" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.262 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=9e-36 ; Q/S_length_ratio=1.178" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.347 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.248" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.375 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=6e-34 ; Q/S_length_ratio=1.289" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.319 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=1.196" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.353 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=1.163" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.367 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=0.986" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DIK4|L0DIK4_SINAD ; ALN/Q_length_ratio=0.259 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4459 PE=4 SV=1 ; EVALUE=1e-32 ; Q/S_length_ratio=0.729" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.294 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.425" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.389 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.017" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.248 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=4e-32 ; Q/S_length_ratio=0.749" /note="Pfam_scan:hit_1 (37..106); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71; EVALUE:3.9e-13; BITSCORE: 48.7" /note="Pfam_scan:hit_2 (131..183); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:1.1e-10; BITSCORE: 40.7" /note="Pfam_scan:hit_3 (340..387); Pfam:PF13783.1:DUF4177; Pfam_type:Family;HMM_aln_Length:57; HMM_Length:61; EVALUE:1.2e-06; BITSCORE: 28.0" /note="Pfam_scan:hit_4 (652..710); Pfam:PF03958.12:Secretin_N; Pfam_type:Domain;HMM_aln_Length:76; HMM_Length:82; EVALUE:3.7e-13; BITSCORE: 49.4" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MTTLLHAVAR RAEAITPDAD LLARFTRDRD HAAFEELVRR HGPLVWAVCR HMLPDHADAE 61 DAFQAVFLAL VRSAATIRDG RTVPAWLHGV AVRVATRAKR SGARRRQREQ IASHAESERP 121 VASASWDALV RSVHEEVQQL PEVERTAFVM CDLEGVSQPD AAARLGWPLG SLSGRLCKAR 181 QRLMERLSAR GVAPAVAIGI GVTASTTGAV PGRLFNVVRA FPSTPTAASK AASVLARGFT 241 EGITMRVKLM VASVVITTLG LTSGAALLSK ADAQPPGGGT GTGSSSGTSA TTTGGSTSTG 301 SSGSSTTTSS TSSADDSGTN SGTTASSNGS GRTNTAPSPA WEYKFVDVRS DRKAFESAIT 361 QHGKDGWEFC SSERFGPAEL VLVFKKSKGG ASGFNPFGGF GGGGGGSFGG GGVGQPGGGG 421 FPGGGGVGGG GGFPGGGGFG GSGSNFPGGG GGSGGFGGNF GGGGGTSGGP GGGGNRGASA 481 DPERSWAMLQ RLTNSTGDTV DLGAIPPQTR DFLKSMTERT GGVPLPEKGT MTKAEYLKYH 541 ARSEAARGAA PGGSGGSGNS SAGGLHGSSS SDSAAVALKN ASADGVVKVI QKEFEKKGLR 601 IAAERTTNAV LIVASAPDDL KSALKRIAEL DAPAAPRVSG GSGTPGKPDA FVNVFTLKHA 661 KAEELVTVLQ KLFPNGTMTA DARTNSIVLS GDTETLDTAR ALIARLDMEV VKPK //