LOCUS VTR91738.1 103 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna-directed rna polymerase subunit
omega : DNA-directed RNA polymerase subunit omega OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=rpoZ PE=3 SV=1: RNA_pol_Rpb6 protein.
ACCESSION LR593886-1039
PROTEIN_ID VTR91738.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_59760"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DAM9|L0DAM9_SINAD ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=rpoZ PE=3 SV=1 ; EVALUE=8e-30 ; Q/S_length_ratio=1.157"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SYU9|D5SYU9_PLAL2 ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=rpoZ
PE=3 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=1.198"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R225|E8R225_ISOPI ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Isosphaera pallida (strain
ATCC 43644 / DSM 9630 / IS1B) GN=rpoZ PE=3 SV=1 ;
EVALUE=1e-23 ; Q/S_length_ratio=0.512"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6CEM8|A6CEM8_9PLAN ;
ALN/Q_length_ratio=0.650 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Planctomyces maris DSM 8797
GN=rpoZ PE=3 SV=1 ; EVALUE=8e-23 ; Q/S_length_ratio=1.120"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5RK69|M5RK69_9PLAN ;
ALN/Q_length_ratio=0.864 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula maiorica SM1
GN=rpoZ PE=3 SV=1 ; EVALUE=3e-22 ; Q/S_length_ratio=1.132"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5DIC3|K5DIC3_RHOBT ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula baltica SH28
GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F2ASW8|F2ASW8_RHOBT ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula baltica WH47
GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5SC69|M5SC69_9PLAN ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula europaea SH398
GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2AP60|M2AP60_9PLAN ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula europaea 6C
GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_11 ; ACCESSION=Q7UP93 ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula baltica (strain
SH1) GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ;
Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CM38|L7CM38_RHOBT ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula baltica SWK14
GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5TRH3|M5TRH3_9PLAN ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula sallentina SM41
GN=rpoZ PE=3 SV=1 ; EVALUE=2e-21 ; Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F0SKF2|F0SKF2_PLABD ;
ALN/Q_length_ratio=0.680 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=rpoZ PE=3 SV=1 ; EVALUE=2e-21 ;
Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5T0A9|M5T0A9_9PLAN ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Rhodopirellula sp. SWK7
GN=rpoZ PE=3 SV=1 ; EVALUE=2e-21 ; Q/S_length_ratio=1.144"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D2QWI5|D2QWI5_PIRSD ;
ALN/Q_length_ratio=0.602 ; DESCRIPTION=DNA-directed RNA
polymerase subunit omega OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=rpoZ PE=3 SV=1 ;
EVALUE=5e-21 ; Q/S_length_ratio=1.184"
/note="Pfam_scan:hit_1 (8..64);
Pfam:PF01192.17:RNA_pol_Rpb6;
Pfam_type:Family;HMM_aln_Length:52; HMM_Length:57;
EVALUE:3e-05; BITSCORE: 23.6"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0005730"
/note="Enzyme_Code:EC:2.7.7.6"
BEGIN
1 MLDELKEEGI VNKVGGRFKL STLIQKRMVA LNTGAKPQVD ARGISDRMAI VIQEILQDKI
61 FLDASGEVQS KNQTVMANLP GAYPGMPGST PPAPGSTAKP SDE
//