LOCUS VTR91738.1 103 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana dna-directed rna polymerase subunit omega : DNA-directed RNA polymerase subunit omega OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpoZ PE=3 SV=1: RNA_pol_Rpb6 protein. ACCESSION LR593886-1039 PROTEIN_ID VTR91738.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_59760" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DAM9|L0DAM9_SINAD ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpoZ PE=3 SV=1 ; EVALUE=8e-30 ; Q/S_length_ratio=1.157" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|D5SYU9|D5SYU9_PLAL2 ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=rpoZ PE=3 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=1.198" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|E8R225|E8R225_ISOPI ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=rpoZ PE=3 SV=1 ; EVALUE=1e-23 ; Q/S_length_ratio=0.512" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|A6CEM8|A6CEM8_9PLAN ; ALN/Q_length_ratio=0.650 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Planctomyces maris DSM 8797 GN=rpoZ PE=3 SV=1 ; EVALUE=8e-23 ; Q/S_length_ratio=1.120" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|M5RK69|M5RK69_9PLAN ; ALN/Q_length_ratio=0.864 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula maiorica SM1 GN=rpoZ PE=3 SV=1 ; EVALUE=3e-22 ; Q/S_length_ratio=1.132" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|K5DIC3|K5DIC3_RHOBT ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula baltica SH28 GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|F2ASW8|F2ASW8_RHOBT ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula baltica WH47 GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|M5SC69|M5SC69_9PLAN ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula europaea SH398 GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M2AP60|M2AP60_9PLAN ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula europaea 6C GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_11 ; ACCESSION=Q7UP93 ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula baltica (strain SH1) GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L7CM38|L7CM38_RHOBT ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula baltica SWK14 GN=rpoZ PE=3 SV=1 ; EVALUE=1e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|M5TRH3|M5TRH3_9PLAN ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula sallentina SM41 GN=rpoZ PE=3 SV=1 ; EVALUE=2e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|F0SKF2|F0SKF2_PLABD ; ALN/Q_length_ratio=0.680 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=rpoZ PE=3 SV=1 ; EVALUE=2e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5T0A9|M5T0A9_9PLAN ; ALN/Q_length_ratio=0.670 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Rhodopirellula sp. SWK7 GN=rpoZ PE=3 SV=1 ; EVALUE=2e-21 ; Q/S_length_ratio=1.144" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|D2QWI5|D2QWI5_PIRSD ; ALN/Q_length_ratio=0.602 ; DESCRIPTION=DNA-directed RNA polymerase subunit omega OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=rpoZ PE=3 SV=1 ; EVALUE=5e-21 ; Q/S_length_ratio=1.184" /note="Pfam_scan:hit_1 (8..64); Pfam:PF01192.17:RNA_pol_Rpb6; Pfam_type:Family;HMM_aln_Length:52; HMM_Length:57; EVALUE:3e-05; BITSCORE: 23.6" /note="GO_domain:GO:0044281" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0016779" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0005730" /note="Enzyme_Code:EC:2.7.7.6" BEGIN 1 MLDELKEEGI VNKVGGRFKL STLIQKRMVA LNTGAKPQVD ARGISDRMAI VIQEILQDKI 61 FLDASGEVQS KNQTVMANLP GAYPGMPGST PPAPGSTAKP SDE //