LOCUS       BAD61694.1               564 aa    PRT              PLN 16-FEB-2008
DEFINITION  Oryza sativa Japonica Group EDR1-like protein.
ACCESSION   AP003685-8
PROTEIN_ID  BAD61694.1
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 138037)
  AUTHORS   Sasaki,T., Matsumoto,T. and Yamamoto,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAY-2001)
            Contact:Takuji Sasaki
            National Institute of Agrobiological Sciences, Rice Genome
            Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
            URL    :http://rgp.dna.affrc.go.jp/
REFERENCE   2
  AUTHORS   Sasaki,T., Matsumoto,T. and Yamamoto,K.
  TITLE     Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6, PAC
            clone:P0548E04
  JOURNAL   Published Only in Database(2001)
COMMENT     Genes were predicted from the integrated results of the following:
            GENSCAN (http://CCR-081.mit.edu/GENSCAN.html), FGENESH
            (http://www.softberry.com/), GeneMark.hmm
            (http://opal.biology.gatech.edu/GeneMark/), GlimmerM
            (http://www.tigr.org/tdb/glimmerm/glmr_form.html), RiceHMM
            (http://rgp.dna.affrc.go.jp/RiceHMM/), SplicePredictor
            (http://bioinformatics.iastate.edu/cgi-bin/sp.cgi), sim4
            (http://globin.cse.psu.edu/html/docs/sim4.html), gap2
            (http://www.tigr.org/software/glimmerm/), BLASTN and BLASTX. The
            genomic sequence was searched against NCBI NonRedundant Protein
            database, nr (ftp://ncbi.nlm.nih.gov/blast/db) and the cDNA
            sequence database at RGP or DDBJ. Protein homologies of the coding
            regions were searched against NCBI NonRedundant Protein database
            with BLASTP. ESTs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no. and RGP clone ID.
            Full-length cDNAs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no.
            
            A gene with identity or significant homology to a protein is
            classified based on the protein name to indicate the homology
            level such as same name, 'putative-' and '-like protein'.  A gene
            without significant homology to any protein but with full-length
            cDNA or EST homology (covering almost the entire length of partial
            sequence) is classified as an 'unknown' protein. A gene predicted
            by two or more gene prediction programs is classified as a
            'hypothetical' protein according to IRGSP standard. A gene
            predicted by a single gene prediction program is also classified
            as a probable 'hypothetical' protein and is included as a
            miscellaneous feature of the sequence.
            
            The orientation of the sequence is from T7 to SP6 of the PAC
            clone. This sequence of P0548E04 clone has an overlap with
            P0535F09 (DDBJ: AP007231) clone at 5' end and with P0017G10 (DDBJ:
            AP004685) at 3' end.  Detailed information on overlap and assembly
            quality together with annotation of this entry is available at
            http://rgp.dna.affrc.go.jp/GenomeSeq.html
FEATURES             Qualifiers
     source          /chromosome="6"
                     /clone="P0548E04"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="genomic DNA"
                     /organism="Oryza sativa Japonica Group"
     protein         /gene="P0548E04.7"
                     /note="MAP kinase kinase kinase-like"
                     /note="contains full-length cDNA(s): AK073747"
     intron_pos      64:2 (1/15)
     intron_pos      103:0 (2/15)
     intron_pos      131:2 (3/15)
     intron_pos      168:2 (4/15)
     intron_pos      187:0 (5/15)
     intron_pos      224:0 (6/15)
     intron_pos      243:0 (7/15)
     intron_pos      299:2 (8/15)
     intron_pos      335:2 (9/15)
     intron_pos      360:1 (10/15)
     intron_pos      419:0 (11/15)
     intron_pos      451:0 (12/15)
     intron_pos      478:0 (13/15)
     intron_pos      496:0 (14/15)
     intron_pos      541:0 (15/15)
BEGIN
        1 MDHGGQVSPV PATATAPRKV RREHMRLGVY HDVLQRLRDA GAPEALAPDF AEKLWTHFHR
       61 FNASYAMDVN VERAEDVLMH MKLLEKAIHP ENQPAFSVRI VQVPLDIDAS EADSQSNITE
      121 DDNCPTPRTP AEHPAPIFGS TTALKALVRQ ASSKNLLDDN QDIDAILRPM HEITFASDDK
      181 PKGLTQLSSL LGNLNLDIKE VHALSTNDGY FLDIFIVIGW DHKETQLLEE ALEKEIHNYE
      241 PQMPSKSSCW PPELAGKQSL INSQVNHVQI PKDNTDEWEI NFDVLDIQEK VASGTYGDLY
      301 RGTYFGEDVA IKVLKSDRLN ENMQEEFNEE VFIMRKIRHK NIVRFLGACT KSPTLCIVTE
      361 FMKNGSVYDY LHKRKGSFKL PSLLKAAVDI SKGMNYLHQN KIIHRDLKTA NLLMDEHELI
      421 KVADFGVARV KAESGIMTAE TGTYRWMAPE VIEHKPYDSK ADVFSFGVVL WELLTGKIPH
      481 EFLTPLQAAI GVVQEGLRPV IPKATDPKLA LLLESCWQQN AVNRPDFVQI LQKLDEIAGE
      541 HGIDLTHPHK EKEKGGFFTF GKVH
//