LOCUS AMU93527.1 900 aa PRT BCT 21-JUN-2016
DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 glutamine-
synthetase adenylyltransferase protein.
ACCESSION CP013342-539
PROTEIN_ID AMU93527.1
SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098
ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098
Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
Sphingomonadaceae; Sphingopyxis.
REFERENCE 1 (bases 1 to 3979087)
AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
111660), a Polyethylene Glycol Degrader
JOURNAL Genome Announc 4 (3) (2016)
PUBMED 27284143
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3979087)
AUTHORS Yoshiyuki,O.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Annotation was conducted using PGAP and MiGAP, and PGAP annotation
was curated by referencing to the MiGAP annotation with the aid of
annotation support tool of GenomeMatcher software.
##Genome-Assembly-Data-START##
Assembly Method :: newbler v. 2.8
Genome Coverage :: 110x
Sequencing Technology :: Illumina MiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 11/30/2015 14:33:14
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 3.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 3,797
CDS :: 3,699
Pseudo Genes :: 49
rRNAs :: 1, 1, 1 (5S, 16S, 23S)
complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)
tRNAs :: 45
ncRNAs :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
/mol_type="genomic DNA"
/strain="203-1"
/sub_species="terrae"
/culture_collection="NBRC:15098"
/type_material="type strain of Sphingomonas terrae"
/db_xref="taxon:1219058"
/geo_loc_name="Japan: Kyoto"
/collection_date="1974"
protein /locus_tag="AOA14_02770"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_003040518.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MTAARQSALD RLTANAPFLA RLAELYPDDV ARFLADGADA ALPPVALPAA DDDIMPALRR
61 WRGRTALLLA LGDLSGEHDV AATTRHLSAF ADAACDAALA AAFAERVPGE APRGIAVIAL
121 GKLGSHELNY SSDIDPILIF DPDTMPRRSR DDPDEAAVRI ARRMVEILSA RTADGHVLRV
181 DLRLRPHPEV TPIVLPESAA ISYYESEALA WEQAAFIRSR ASAGDRALGE HFLDAIQPFI
241 WRRSLDFRQL KEIGAMSDRI RDHFAQGQAF GPGFDLKRGR GGIREIEFFA QVHQLIYGGR
301 DPSLRVPATV DALAALAGAG RIDADIATRL ADHYAVLRRI EHRLQMIEDQ QTHSLPVQPV
361 ALDAVARLDG APNGAALLAA LEPVVTDVGA VYDRLVAERA VARGLPMGEG ELAGALAAAG
421 FDPPDAALRT ITEWRGGKAR ALRSPAALEA LETVLPELVR ALGAAPDPDA ALVRFDKLVG
481 GLPSAVGFFH LLAAQPALAK IATRILALAP ALSDALAARV ELIEGLIDAR AFEAPASKTE
541 LLAEWAPTLA GLDYERLLDR VRDRVGERRF AYGVQLIAGS TDPLIVARGY ADLAEAALQV
601 LADATVAEFV VAHGRVPNSE LVVLALGRLG GSALTHASDL DLIYLFTGDH LAESDGLRPL
661 GATTYYNRLA QRVTAAMSVP TAAGKLYDVD VRLRPSGAQG PLVVTVDSFD RYQREEAWTW
721 EHMALLRARA VYGSDAARAE VGRVIEKVLT APRDRAAVVA DAATMRDKIA AHKPPQGALD
781 IKGGPGGLVD LEFAMQTEQL ASGRCRDPHI PTALACLEAA ALAPTGMGTA HALLARMLVM
841 LRLTAPEGAP ANAAARKLVA SACGEPGWPQ LLAAHDAARQ EVGDWWAAIR SAAPQKEKDE
//