LOCUS AMU93527.1 900 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 glutamine- synthetase adenylyltransferase protein. ACCESSION CP013342-539 PROTEIN_ID AMU93527.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_02770" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003040518.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTAARQSALD RLTANAPFLA RLAELYPDDV ARFLADGADA ALPPVALPAA DDDIMPALRR 61 WRGRTALLLA LGDLSGEHDV AATTRHLSAF ADAACDAALA AAFAERVPGE APRGIAVIAL 121 GKLGSHELNY SSDIDPILIF DPDTMPRRSR DDPDEAAVRI ARRMVEILSA RTADGHVLRV 181 DLRLRPHPEV TPIVLPESAA ISYYESEALA WEQAAFIRSR ASAGDRALGE HFLDAIQPFI 241 WRRSLDFRQL KEIGAMSDRI RDHFAQGQAF GPGFDLKRGR GGIREIEFFA QVHQLIYGGR 301 DPSLRVPATV DALAALAGAG RIDADIATRL ADHYAVLRRI EHRLQMIEDQ QTHSLPVQPV 361 ALDAVARLDG APNGAALLAA LEPVVTDVGA VYDRLVAERA VARGLPMGEG ELAGALAAAG 421 FDPPDAALRT ITEWRGGKAR ALRSPAALEA LETVLPELVR ALGAAPDPDA ALVRFDKLVG 481 GLPSAVGFFH LLAAQPALAK IATRILALAP ALSDALAARV ELIEGLIDAR AFEAPASKTE 541 LLAEWAPTLA GLDYERLLDR VRDRVGERRF AYGVQLIAGS TDPLIVARGY ADLAEAALQV 601 LADATVAEFV VAHGRVPNSE LVVLALGRLG GSALTHASDL DLIYLFTGDH LAESDGLRPL 661 GATTYYNRLA QRVTAAMSVP TAAGKLYDVD VRLRPSGAQG PLVVTVDSFD RYQREEAWTW 721 EHMALLRARA VYGSDAARAE VGRVIEKVLT APRDRAAVVA DAATMRDKIA AHKPPQGALD 781 IKGGPGGLVD LEFAMQTEQL ASGRCRDPHI PTALACLEAA ALAPTGMGTA HALLARMLVM 841 LRLTAPEGAP ANAAARKLVA SACGEPGWPQ LLAAHDAARQ EVGDWWAAIR SAAPQKEKDE //