LOCUS AEE86426.1 1089 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002687-6441
PROTEIN_ID AEE86426.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="MRL1"
/locus_tag="AT4G34830"
/gene_synonym="F11I11.70"
/gene_synonym="F11I11_70"
/gene_synonym="MATURATION OF RBCL 1"
/gene_synonym="PDE346"
/gene_synonym="PIGMENT DEFECTIVE 346"
/inference="Similar to RNA sequence,
EST:INSD:EH895159.1,INSD:BP780574.1,INSD:EG521591.1,
INSD:EL236488.1,INSD:EL232669.1,INSD:ES025242.1,
INSD:DR354769.1,INSD:ES062188.1,INSD:AV528646.1,
INSD:AA651452.1,INSD:EL106953.1,INSD:BP780008.1,
INSD:DR383626.1,INSD:BP804470.1,INSD:R90347.1,
INSD:EL187885.1,INSD:BU636403.1,INSD:EH905674.1,
INSD:AV528299.1,INSD:EL027952.1,INSD:EH932621.1,
INSD:DR256697.1,INSD:AV558343.1,INSD:EL210698.1,
INSD:EL048000.1,INSD:ES162470.1,INSD:ES105773.1,
INSD:AV528219.1,INSD:ES075089.1,INSD:ES194374.1,
INSD:EL215461.1,INSD:EH956847.1,INSD:ES121591.1,
INSD:EL133882.1,INSD:EL083914.1,INSD:EG521592.1,
INSD:DR256698.1,INSD:EG428963.1,INSD:ES015620.1,
INSD:AV529981.1,INSD:W43742.1,INSD:ES163024.1,
INSD:DR256696.1,INSD:EL317404.1,INSD:AV530159.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT012016.1,INSD:AK226737.1,INSD:AK230279.1,
INSD:BT012281.1,INSD:BX826878.1"
/note="MATURATION OF RBCL 1 (MRL1); INVOLVED IN: mRNA
stabilization; LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has
45662 Blast hits to 13867 proteins in 283 species: Archae
- 3; Bacteria - 43; Metazoa - 608; Fungi - 635; Plants -
42548; Viruses - 0; Other Eukaryotes - 1825 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G34830"
/db_xref="Araport:AT4G34830"
intron_pos 110:0 (1/18)
intron_pos 340:1 (2/18)
intron_pos 415:2 (3/18)
intron_pos 437:0 (4/18)
intron_pos 485:1 (5/18)
intron_pos 524:0 (6/18)
intron_pos 567:0 (7/18)
intron_pos 625:0 (8/18)
intron_pos 680:0 (9/18)
intron_pos 727:0 (10/18)
intron_pos 760:1 (11/18)
intron_pos 796:2 (12/18)
intron_pos 827:1 (13/18)
intron_pos 857:2 (14/18)
intron_pos 935:0 (15/18)
intron_pos 966:0 (16/18)
intron_pos 982:1 (17/18)
intron_pos 1013:2 (18/18)
BEGIN
1 MEVTSTTFIS TTRSSKYLTL TSYSPVILPA STLRRDFLGC CHSLRPSPHL RTRAGKRNSR
61 RSSIRSPRLV VRASIDSGLI LIVVAVTAFS AIAFAYCQST FRKRKSSDEV ATVHGGKNSA
121 ENRREIHGDI HEGNPVEINV GFRKVEEESV NLLEEEKAHQ IHEVAVMDYD SVSAEDSQFA
181 VASVTTVATA HTLIDESFSS SIVNGSVALE SATFGVKTPE KQVGNSEDQK GLEHDFSQAV
241 VGIHSIASPQ VVDDTRALEY EYNGLLQKPL EYSIFAESKR EEIHTFYGSN HSSAKSSRLP
301 SLKAVSPAVT SATNSLFLDH KNNGVIDTQF PGQSSGQATG DVQEENLVAH SNGGVSHIRK
361 DVKGDWKFPS DGKHVGHQID ESMPQFPARN FELHNSNGRS PETSDAYNRL LRDGRIKDCI
421 SLLEDLDQRD LLDMDKIYHA SFFKACKKQR AVKEAFRFTK LILNPTMSTF NMLMSVCASS
481 QDIEGARGVL RLVQESGMTA DCKLYTTLIS SCAKSGKVDA MFEVFHQMSN SGVEANLHTF
541 GALIDGCARA GQVAKAFGAY GILRSKNVKP DRVVFNALIS ACGQSGAVDR AFDVLAEMKA
601 ETHPIDPDHI SIGALMKACC NAGQVERAKE VYQMIHKYGI RGTPEVYTIA VNSCSKSGDW
661 DFACSIYKDM KEKDVTPDEV FFSALIDVAG HAKMLDEAFG ILQDAKSQGI RLGTISYSSL
721 MGACCNAKDW KKALELYEKI KSIKLRPTIS TMNALITALC EGNQLPKAME YLDEIKTLGL
781 KPNTITYSML MLASERKDDF EVSFKLLSQA KGDGVSPNLI MCRCITSLCK RRFEKACAGG
841 EPVVSFKSGR PQIENKWTSM ALMVYRETIS GGTVPTTEVV SQVLGCLQLP HDAALRDRLI
901 STLGINISSQ KQHNIFPLVD GFGEYDPRAF SLLEEATSLG VLPSVSFNKI PLFFDTTELP
961 KNVAEVYLLT IFKGLKHRLA AGAKIPHINL IISIQEKEIR TPEGEKTIDL TGRVGQEIGA
1021 LLRRLDIPYH RKDSRLRING VSLKNWFQPK LDSPFSGGKP GDLRSSQVPL GNQISRQQRS
1081 IRLGNLSLE
//