LOCUS AEE86426.1 1089 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein protein. ACCESSION CP002687-6441 PROTEIN_ID AEE86426.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="MRL1" /locus_tag="AT4G34830" /gene_synonym="F11I11.70" /gene_synonym="F11I11_70" /gene_synonym="MATURATION OF RBCL 1" /gene_synonym="PDE346" /gene_synonym="PIGMENT DEFECTIVE 346" /inference="Similar to RNA sequence, EST:INSD:EH895159.1,INSD:BP780574.1,INSD:EG521591.1, INSD:EL236488.1,INSD:EL232669.1,INSD:ES025242.1, INSD:DR354769.1,INSD:ES062188.1,INSD:AV528646.1, INSD:AA651452.1,INSD:EL106953.1,INSD:BP780008.1, INSD:DR383626.1,INSD:BP804470.1,INSD:R90347.1, INSD:EL187885.1,INSD:BU636403.1,INSD:EH905674.1, INSD:AV528299.1,INSD:EL027952.1,INSD:EH932621.1, INSD:DR256697.1,INSD:AV558343.1,INSD:EL210698.1, INSD:EL048000.1,INSD:ES162470.1,INSD:ES105773.1, INSD:AV528219.1,INSD:ES075089.1,INSD:ES194374.1, INSD:EL215461.1,INSD:EH956847.1,INSD:ES121591.1, INSD:EL133882.1,INSD:EL083914.1,INSD:EG521592.1, INSD:DR256698.1,INSD:EG428963.1,INSD:ES015620.1, INSD:AV529981.1,INSD:W43742.1,INSD:ES163024.1, INSD:DR256696.1,INSD:EL317404.1,INSD:AV530159.1" /inference="Similar to RNA sequence, mRNA:INSD:BT012016.1,INSD:AK226737.1,INSD:AK230279.1, INSD:BT012281.1,INSD:BX826878.1" /note="MATURATION OF RBCL 1 (MRL1); INVOLVED IN: mRNA stabilization; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 45662 Blast hits to 13867 proteins in 283 species: Archae - 3; Bacteria - 43; Metazoa - 608; Fungi - 635; Plants - 42548; Viruses - 0; Other Eukaryotes - 1825 (source: NCBI BLink)." /db_xref="TAIR:AT4G34830" /db_xref="Araport:AT4G34830" intron_pos 110:0 (1/18) intron_pos 340:1 (2/18) intron_pos 415:2 (3/18) intron_pos 437:0 (4/18) intron_pos 485:1 (5/18) intron_pos 524:0 (6/18) intron_pos 567:0 (7/18) intron_pos 625:0 (8/18) intron_pos 680:0 (9/18) intron_pos 727:0 (10/18) intron_pos 760:1 (11/18) intron_pos 796:2 (12/18) intron_pos 827:1 (13/18) intron_pos 857:2 (14/18) intron_pos 935:0 (15/18) intron_pos 966:0 (16/18) intron_pos 982:1 (17/18) intron_pos 1013:2 (18/18) BEGIN 1 MEVTSTTFIS TTRSSKYLTL TSYSPVILPA STLRRDFLGC CHSLRPSPHL RTRAGKRNSR 61 RSSIRSPRLV VRASIDSGLI LIVVAVTAFS AIAFAYCQST FRKRKSSDEV ATVHGGKNSA 121 ENRREIHGDI HEGNPVEINV GFRKVEEESV NLLEEEKAHQ IHEVAVMDYD SVSAEDSQFA 181 VASVTTVATA HTLIDESFSS SIVNGSVALE SATFGVKTPE KQVGNSEDQK GLEHDFSQAV 241 VGIHSIASPQ VVDDTRALEY EYNGLLQKPL EYSIFAESKR EEIHTFYGSN HSSAKSSRLP 301 SLKAVSPAVT SATNSLFLDH KNNGVIDTQF PGQSSGQATG DVQEENLVAH SNGGVSHIRK 361 DVKGDWKFPS DGKHVGHQID ESMPQFPARN FELHNSNGRS PETSDAYNRL LRDGRIKDCI 421 SLLEDLDQRD LLDMDKIYHA SFFKACKKQR AVKEAFRFTK LILNPTMSTF NMLMSVCASS 481 QDIEGARGVL RLVQESGMTA DCKLYTTLIS SCAKSGKVDA MFEVFHQMSN SGVEANLHTF 541 GALIDGCARA GQVAKAFGAY GILRSKNVKP DRVVFNALIS ACGQSGAVDR AFDVLAEMKA 601 ETHPIDPDHI SIGALMKACC NAGQVERAKE VYQMIHKYGI RGTPEVYTIA VNSCSKSGDW 661 DFACSIYKDM KEKDVTPDEV FFSALIDVAG HAKMLDEAFG ILQDAKSQGI RLGTISYSSL 721 MGACCNAKDW KKALELYEKI KSIKLRPTIS TMNALITALC EGNQLPKAME YLDEIKTLGL 781 KPNTITYSML MLASERKDDF EVSFKLLSQA KGDGVSPNLI MCRCITSLCK RRFEKACAGG 841 EPVVSFKSGR PQIENKWTSM ALMVYRETIS GGTVPTTEVV SQVLGCLQLP HDAALRDRLI 901 STLGINISSQ KQHNIFPLVD GFGEYDPRAF SLLEEATSLG VLPSVSFNKI PLFFDTTELP 961 KNVAEVYLLT IFKGLKHRLA AGAKIPHINL IISIQEKEIR TPEGEKTIDL TGRVGQEIGA 1021 LLRRLDIPYH RKDSRLRING VSLKNWFQPK LDSPFSGGKP GDLRSSQVPL GNQISRQQRS 1081 IRLGNLSLE //