LOCUS AEE85986.1 51 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L39 family protein protein.
ACCESSION CP002687-5842
PROTEIN_ID AEE85986.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G31985"
/inference="Similar to RNA sequence,
EST:INSD:BP867650.1,INSD:EH980874.1,INSD:EL309063.1,
INSD:EH852364.1,INSD:DR277961.1,INSD:DR277992.1,
INSD:BP818180.1,INSD:EL978597.1,INSD:EH937179.1,
INSD:EL229159.1,INSD:BP664729.1,INSD:ES152950.1,
INSD:DR277975.1,INSD:DR277972.1,INSD:ES131120.1,
INSD:EH824840.1,INSD:EL997532.1,INSD:EG445851.1,
INSD:EL120252.1,INSD:ES064871.1,INSD:ES143406.1,
INSD:DR277956.1,INSD:DR277998.1,INSD:EL976222.1,
INSD:ES175058.1,INSD:DR277957.1,INSD:ES101649.1,
INSD:BP843525.1,INSD:ES157833.1,INSD:EL304844.1,
INSD:EL034420.1,INSD:ES130308.1,INSD:DR277960.1,
INSD:ES188406.1,INSD:ES054470.1,INSD:EH838339.1,
INSD:BP823800.1,INSD:EL107851.1,INSD:ES172458.1,
INSD:DR277999.1,INSD:CK118902.1,INSD:DR382372.1,
INSD:ES133911.1,INSD:EL258380.1,INSD:ES170575.1,
INSD:DR278001.1,INSD:DR277963.1,INSD:ES157008.1,
INSD:ES171067.1,INSD:ES200490.1,INSD:ES184285.1,
INSD:DR277958.1,INSD:EL245629.1,INSD:ES146884.1,
INSD:ES132342.1,INSD:DR278002.1,INSD:DR277952.1,
INSD:BP817247.1,INSD:EL073244.1,INSD:EL161099.1,
INSD:DR277948.1,INSD:BP585605.1,INSD:BP848811.1,
INSD:ES118897.1,INSD:ES091783.1,INSD:DR277943.1,
INSD:EL015589.1,INSD:DR277977.1,INSD:EH830255.1,
INSD:ES026641.1,INSD:EL232423.1,INSD:ES039161.1,
INSD:ES035599.1,INSD:DR277993.1,INSD:DR277978.1,
INSD:EH819928.1,INSD:AU239089.1,INSD:DR278016.1,
INSD:DR277954.1,INSD:ES010110.1,INSD:DR278010.1,
INSD:DR277994.1,INSD:EL007284.1,INSD:ES163532.1,
INSD:EL105642.1,INSD:BP629339.1,INSD:ES143679.1,
INSD:ES180685.1,INSD:EH896244.1,INSD:DR277988.1,
INSD:ES065566.1,INSD:ES064948.1,INSD:ES215597.1,
INSD:DR277974.1,INSD:EL186892.1,INSD:DR277979.1,
INSD:DR278011.1,INSD:EL305192.1,INSD:ES070613.1,
INSD:ES201596.1,INSD:EL213814.1,INSD:DR277966.1,
INSD:EL050724.1,INSD:EL973013.1,INSD:ES030017.1,
INSD:ES093656.1,INSD:ES188992.1,INSD:DR277980.1,
INSD:DR277990.1,INSD:EL341623.1,INSD:EL042616.1,
INSD:EH911588.1,INSD:ES163390.1,INSD:DR277967.1,
INSD:EH857310.1,INSD:ES020708.1,INSD:ES179281.1,
INSD:DR278015.1,INSD:ES125545.1,INSD:DR277959.1,
INSD:DR277949.1,INSD:DR277971.1,INSD:DR277981.1,
INSD:EL172907.1,INSD:BP865306.1,INSD:EH864243.1,
INSD:BP851819.1,INSD:DR278000.1,INSD:EL301917.1,
INSD:EH818757.1,INSD:DR277939.1,INSD:BP655748.1,
INSD:DR277991.1,INSD:EH865925.1,INSD:BE038726.1,
INSD:EH963177.1,INSD:DR277940.1,INSD:DR277986.1,
INSD:EL987556.1,INSD:ES013920.1,INSD:EL180387.1,
INSD:ES041341.1,INSD:ES012798.1,INSD:EL999762.1,
INSD:DR277955.1,INSD:DR278006.1,INSD:DR277938.1,
INSD:ES206795.1,INSD:ES105992.1,INSD:ES192441.1,
INSD:EL972722.1,INSD:DR277941.1,INSD:AA586139.1,
INSD:ES041519.1,INSD:ES161067.1,INSD:EL177984.1,
INSD:BP598915.1,INSD:BP854508.1,INSD:ES179099.1,
INSD:DR277985.1,INSD:ES084637.1,INSD:DR277947.1,
INSD:EL091001.1,INSD:ES150339.1,INSD:ES169464.1,
INSD:EL324910.1,INSD:DR277982.1,INSD:DR277946.1,
INSD:DR277973.1,INSD:ES018497.1,INSD:EL993164.1,
INSD:BP621861.1,INSD:EH809516.1,INSD:DR277937.1,
INSD:EL052711.1,INSD:BP814469.1,INSD:BP832058.1,
INSD:DR277968.1,INSD:EH992316.1,INSD:BP658242.1,
INSD:DR277945.1,INSD:DR277944.1,INSD:ES142998.1,
INSD:DR277987.1,INSD:ES035975.1,INSD:DR277995.1,
INSD:EL293004.1,INSD:BP663889.1,INSD:EL145723.1,
INSD:DR277942.1,INSD:EL077895.1,INSD:ES152483.1,
INSD:DR277950.1,INSD:DR277997.1,INSD:EL977314.1,
INSD:ES126269.1,INSD:CB260907.1,INSD:DR277962.1,
INSD:ES128077.1,INSD:EL166506.1,INSD:AV536940.1,
INSD:DR277970.1,INSD:EL047965.1,INSD:ES112579.1,
INSD:DR277964.1,INSD:EL037738.1,INSD:ES212859.1,
INSD:DR277996.1,INSD:DR278004.1,INSD:EH874083.1,
INSD:DR278003.1,INSD:DR278012.1,INSD:EH924613.1,
INSD:EL015104.1,INSD:EL283402.1,INSD:ES000103.1,
INSD:EL968223.1,INSD:ES049928.1,INSD:DR278009.1,
INSD:DR277989.1,INSD:ES142222.1,INSD:DR277965.1,
INSD:ES144839.1,INSD:ES132658.1,INSD:ES170553.1,
INSD:AV781453.1,INSD:ES136533.1,INSD:ES190266.1,
INSD:DR277976.1,INSD:Z47609.1,INSD:DR277983.1,
INSD:ES055552.1,INSD:ES002762.1,INSD:ES073216.1,
INSD:EL108250.1,INSD:DR278005.1,INSD:EH882855.1,
INSD:DR278007.1,INSD:DR277969.1,INSD:ES088799.1,
INSD:DR277951.1,INSD:DR278018.1,INSD:BP626948.1,
INSD:DR372419.1,INSD:BP855197.1,INSD:EL293533.1,
INSD:ES159483.1,INSD:AU230363.1,INSD:ES164770.1,
INSD:BP668126.1,INSD:EL302183.1,INSD:EL319562.1,
INSD:EH989356.1,INSD:EL063192.1,INSD:BP564656.1,
INSD:DR278014.1,INSD:ES178074.1,INSD:DR277953.1,
INSD:DR278013.1,INSD:ES060520.1,INSD:EL192260.1,
INSD:DR278008.1,INSD:DR277984.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF372908.1,INSD:BX826958.1,INSD:AK118235.1"
/note="Ribosomal protein L39 family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: ribosome, cytosolic large
ribosomal subunit; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L39e, conserved site
(InterPro:IPR020083), Ribosomal protein L39e
(InterPro:IPR000077); BEST Arabidopsis thaliana protein
match is: Ribosomal protein L39 family protein
(TAIR:AT3G02190.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G31985"
/db_xref="Araport:AT4G31985"
intron_pos 2:0 (1/2)
intron_pos 36:2 (2/2)
BEGIN
1 MPSHKSFMIK KKLGKKMRQN RPIPHWIRLR TDNTIRYNAK RRHWRRTKLG F
//