LOCUS AEE85986.1 51 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Ribosomal protein L39 family protein protein. ACCESSION CP002687-5842 PROTEIN_ID AEE85986.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G31985" /inference="Similar to RNA sequence, EST:INSD:BP867650.1,INSD:EH980874.1,INSD:EL309063.1, INSD:EH852364.1,INSD:DR277961.1,INSD:DR277992.1, INSD:BP818180.1,INSD:EL978597.1,INSD:EH937179.1, INSD:EL229159.1,INSD:BP664729.1,INSD:ES152950.1, INSD:DR277975.1,INSD:DR277972.1,INSD:ES131120.1, INSD:EH824840.1,INSD:EL997532.1,INSD:EG445851.1, INSD:EL120252.1,INSD:ES064871.1,INSD:ES143406.1, INSD:DR277956.1,INSD:DR277998.1,INSD:EL976222.1, INSD:ES175058.1,INSD:DR277957.1,INSD:ES101649.1, INSD:BP843525.1,INSD:ES157833.1,INSD:EL304844.1, INSD:EL034420.1,INSD:ES130308.1,INSD:DR277960.1, INSD:ES188406.1,INSD:ES054470.1,INSD:EH838339.1, INSD:BP823800.1,INSD:EL107851.1,INSD:ES172458.1, INSD:DR277999.1,INSD:CK118902.1,INSD:DR382372.1, INSD:ES133911.1,INSD:EL258380.1,INSD:ES170575.1, INSD:DR278001.1,INSD:DR277963.1,INSD:ES157008.1, INSD:ES171067.1,INSD:ES200490.1,INSD:ES184285.1, INSD:DR277958.1,INSD:EL245629.1,INSD:ES146884.1, INSD:ES132342.1,INSD:DR278002.1,INSD:DR277952.1, INSD:BP817247.1,INSD:EL073244.1,INSD:EL161099.1, INSD:DR277948.1,INSD:BP585605.1,INSD:BP848811.1, INSD:ES118897.1,INSD:ES091783.1,INSD:DR277943.1, INSD:EL015589.1,INSD:DR277977.1,INSD:EH830255.1, INSD:ES026641.1,INSD:EL232423.1,INSD:ES039161.1, INSD:ES035599.1,INSD:DR277993.1,INSD:DR277978.1, INSD:EH819928.1,INSD:AU239089.1,INSD:DR278016.1, INSD:DR277954.1,INSD:ES010110.1,INSD:DR278010.1, INSD:DR277994.1,INSD:EL007284.1,INSD:ES163532.1, INSD:EL105642.1,INSD:BP629339.1,INSD:ES143679.1, INSD:ES180685.1,INSD:EH896244.1,INSD:DR277988.1, INSD:ES065566.1,INSD:ES064948.1,INSD:ES215597.1, INSD:DR277974.1,INSD:EL186892.1,INSD:DR277979.1, INSD:DR278011.1,INSD:EL305192.1,INSD:ES070613.1, INSD:ES201596.1,INSD:EL213814.1,INSD:DR277966.1, INSD:EL050724.1,INSD:EL973013.1,INSD:ES030017.1, INSD:ES093656.1,INSD:ES188992.1,INSD:DR277980.1, INSD:DR277990.1,INSD:EL341623.1,INSD:EL042616.1, INSD:EH911588.1,INSD:ES163390.1,INSD:DR277967.1, INSD:EH857310.1,INSD:ES020708.1,INSD:ES179281.1, INSD:DR278015.1,INSD:ES125545.1,INSD:DR277959.1, INSD:DR277949.1,INSD:DR277971.1,INSD:DR277981.1, INSD:EL172907.1,INSD:BP865306.1,INSD:EH864243.1, INSD:BP851819.1,INSD:DR278000.1,INSD:EL301917.1, INSD:EH818757.1,INSD:DR277939.1,INSD:BP655748.1, INSD:DR277991.1,INSD:EH865925.1,INSD:BE038726.1, INSD:EH963177.1,INSD:DR277940.1,INSD:DR277986.1, INSD:EL987556.1,INSD:ES013920.1,INSD:EL180387.1, INSD:ES041341.1,INSD:ES012798.1,INSD:EL999762.1, INSD:DR277955.1,INSD:DR278006.1,INSD:DR277938.1, INSD:ES206795.1,INSD:ES105992.1,INSD:ES192441.1, INSD:EL972722.1,INSD:DR277941.1,INSD:AA586139.1, INSD:ES041519.1,INSD:ES161067.1,INSD:EL177984.1, INSD:BP598915.1,INSD:BP854508.1,INSD:ES179099.1, INSD:DR277985.1,INSD:ES084637.1,INSD:DR277947.1, INSD:EL091001.1,INSD:ES150339.1,INSD:ES169464.1, INSD:EL324910.1,INSD:DR277982.1,INSD:DR277946.1, INSD:DR277973.1,INSD:ES018497.1,INSD:EL993164.1, INSD:BP621861.1,INSD:EH809516.1,INSD:DR277937.1, INSD:EL052711.1,INSD:BP814469.1,INSD:BP832058.1, INSD:DR277968.1,INSD:EH992316.1,INSD:BP658242.1, INSD:DR277945.1,INSD:DR277944.1,INSD:ES142998.1, INSD:DR277987.1,INSD:ES035975.1,INSD:DR277995.1, INSD:EL293004.1,INSD:BP663889.1,INSD:EL145723.1, INSD:DR277942.1,INSD:EL077895.1,INSD:ES152483.1, INSD:DR277950.1,INSD:DR277997.1,INSD:EL977314.1, INSD:ES126269.1,INSD:CB260907.1,INSD:DR277962.1, INSD:ES128077.1,INSD:EL166506.1,INSD:AV536940.1, INSD:DR277970.1,INSD:EL047965.1,INSD:ES112579.1, INSD:DR277964.1,INSD:EL037738.1,INSD:ES212859.1, INSD:DR277996.1,INSD:DR278004.1,INSD:EH874083.1, INSD:DR278003.1,INSD:DR278012.1,INSD:EH924613.1, INSD:EL015104.1,INSD:EL283402.1,INSD:ES000103.1, INSD:EL968223.1,INSD:ES049928.1,INSD:DR278009.1, INSD:DR277989.1,INSD:ES142222.1,INSD:DR277965.1, INSD:ES144839.1,INSD:ES132658.1,INSD:ES170553.1, INSD:AV781453.1,INSD:ES136533.1,INSD:ES190266.1, INSD:DR277976.1,INSD:Z47609.1,INSD:DR277983.1, INSD:ES055552.1,INSD:ES002762.1,INSD:ES073216.1, INSD:EL108250.1,INSD:DR278005.1,INSD:EH882855.1, INSD:DR278007.1,INSD:DR277969.1,INSD:ES088799.1, INSD:DR277951.1,INSD:DR278018.1,INSD:BP626948.1, INSD:DR372419.1,INSD:BP855197.1,INSD:EL293533.1, INSD:ES159483.1,INSD:AU230363.1,INSD:ES164770.1, INSD:BP668126.1,INSD:EL302183.1,INSD:EL319562.1, INSD:EH989356.1,INSD:EL063192.1,INSD:BP564656.1, INSD:DR278014.1,INSD:ES178074.1,INSD:DR277953.1, INSD:DR278013.1,INSD:ES060520.1,INSD:EL192260.1, INSD:DR278008.1,INSD:DR277984.1" /inference="Similar to RNA sequence, mRNA:INSD:AF372908.1,INSD:BX826958.1,INSD:AK118235.1" /note="Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT3G02190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT4G31985" /db_xref="Araport:AT4G31985" intron_pos 2:0 (1/2) intron_pos 36:2 (2/2) BEGIN 1 MPSHKSFMIK KKLGKKMRQN RPIPHWIRLR TDNTIRYNAK RRHWRRTKLG F //