LOCUS AEE84408.1 691 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribophorin II (RPN2) family protein protein.
ACCESSION CP002687-3689
PROTEIN_ID AEE84408.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="HAP6"
/locus_tag="AT4G21150"
/gene_synonym="F7J7.90"
/gene_synonym="F7J7_90"
/gene_synonym="HAPLESS 6"
/gene_synonym="RIBOPHORIN II"
/gene_synonym="RPN2"
/inference="Similar to RNA sequence,
EST:INSD:ES161825.1,INSD:ES096675.1,INSD:BP567069.1,
INSD:ES145371.1,INSD:ES003509.1,INSD:DR268031.1,
INSD:DR268030.1,INSD:ES034549.1,INSD:EL322518.1,
INSD:AV547058.1,INSD:EL229523.1,INSD:ES037063.1,
INSD:AV561216.1,INSD:EL024761.1,INSD:DR372946.1,
INSD:BP566210.1,INSD:ES070257.1,INSD:EL260944.1,
INSD:ES051761.1,INSD:EL079331.1,INSD:BP580528.1,
INSD:EH847562.1,INSD:AV796864.1,INSD:BP570433.1,
INSD:ES129142.1,INSD:ES074335.1,INSD:BP584053.1,
INSD:BP581653.1,INSD:ES080922.1,INSD:BX837014.1,
INSD:BP787490.1,INSD:CF651672.1,INSD:EL142847.1,
INSD:BP802381.1,INSD:BP568959.1,INSD:AI995972.1,
INSD:DR268027.1,INSD:ES100594.1,INSD:AV799814.1,
INSD:BP582333.1,INSD:ES022186.1,INSD:DR268028.1,
INSD:ES211817.1,INSD:AV566704.1,INSD:ES082905.1,
INSD:ES014672.1,INSD:DR268032.1,INSD:DR268036.1,
INSD:BP576964.1,INSD:EL265880.1,INSD:ES199344.1,
INSD:BP816897.1,INSD:ES011253.1,INSD:EH945243.1,
INSD:ES071763.1,INSD:EH877967.1,INSD:DR268035.1,
INSD:BP578662.1,INSD:EL207235.1,INSD:ES155028.1,
INSD:BP664849.1,INSD:EL014844.1,INSD:AV790072.1,
INSD:EL258767.1,INSD:ES034217.1,INSD:EL982215.1,
INSD:DR268033.1,INSD:DR268029.1,INSD:BP586196.1,
INSD:CF774050.1,INSD:BP778625.1,INSD:AV559700.1,
INSD:BP594105.1,INSD:ES049999.1,INSD:AV813438.1,
INSD:ES041149.1,INSD:Z25685.1,INSD:EL272228.1,
INSD:ES054421.1,INSD:AV558743.1,INSD:ES005341.1,
INSD:EL012415.1,INSD:DR268026.1,INSD:EH993872.1,
INSD:ES099398.1,INSD:F14024.1,INSD:BX834203.1,
INSD:DR268034.1,INSD:EL970203.1,INSD:AV531712.1,
INSD:EH827697.1,INSD:AV556321.1,INSD:AV795693.1,
INSD:EL245925.1,INSD:BP799584.1,INSD:ES122795.1,
INSD:BP578564.1,INSD:EL105908.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY058845.1,INSD:AY079034.1"
/note="HAPLESS 6 (HAP6); FUNCTIONS IN:
dolichyl-diphosphooligosaccharide-protein glycotransferase
activity; INVOLVED IN: response to cold, protein amino
acid terminal N-glycosylation; LOCATED IN: in 6
components; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Ribophorin II (InterPro:IPR008814); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G21150"
/db_xref="Araport:AT4G21150"
intron_pos 49:2 (1/18)
intron_pos 114:0 (2/18)
intron_pos 144:0 (3/18)
intron_pos 165:0 (4/18)
intron_pos 188:1 (5/18)
intron_pos 210:0 (6/18)
intron_pos 228:1 (7/18)
intron_pos 269:0 (8/18)
intron_pos 307:2 (9/18)
intron_pos 331:0 (10/18)
intron_pos 366:0 (11/18)
intron_pos 396:0 (12/18)
intron_pos 445:2 (13/18)
intron_pos 483:0 (14/18)
intron_pos 511:0 (15/18)
intron_pos 538:0 (16/18)
intron_pos 613:0 (17/18)
intron_pos 654:0 (18/18)
BEGIN
1 MMAGGNVRFL VLILAVAICG AASVFQPISD SHRSAALDVF VPVDGSYKSL EEAYEALKTL
61 EILGIDKKSD LSSKTCENVV KVLQSSSSTL KDAFYALNVN GILKCKIGEA GPKDIVSQLQ
121 AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP
181 ESSTFAAGLA YETLAGVISL APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD
241 ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301 ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS
361 VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE SAHEKVYITE AQTKVPIAAT
421 GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP
481 HQAFFKLKHE SQVEHIFLVK TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS
541 LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601 VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL
661 KALSLLGVFL LFVGHRTLSQ LASASNKLKS A
//