LOCUS AEE84408.1 691 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana ribophorin II (RPN2) family protein protein. ACCESSION CP002687-3689 PROTEIN_ID AEE84408.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="HAP6" /locus_tag="AT4G21150" /gene_synonym="F7J7.90" /gene_synonym="F7J7_90" /gene_synonym="HAPLESS 6" /gene_synonym="RIBOPHORIN II" /gene_synonym="RPN2" /inference="Similar to RNA sequence, EST:INSD:ES161825.1,INSD:ES096675.1,INSD:BP567069.1, INSD:ES145371.1,INSD:ES003509.1,INSD:DR268031.1, INSD:DR268030.1,INSD:ES034549.1,INSD:EL322518.1, INSD:AV547058.1,INSD:EL229523.1,INSD:ES037063.1, INSD:AV561216.1,INSD:EL024761.1,INSD:DR372946.1, INSD:BP566210.1,INSD:ES070257.1,INSD:EL260944.1, INSD:ES051761.1,INSD:EL079331.1,INSD:BP580528.1, INSD:EH847562.1,INSD:AV796864.1,INSD:BP570433.1, INSD:ES129142.1,INSD:ES074335.1,INSD:BP584053.1, INSD:BP581653.1,INSD:ES080922.1,INSD:BX837014.1, INSD:BP787490.1,INSD:CF651672.1,INSD:EL142847.1, INSD:BP802381.1,INSD:BP568959.1,INSD:AI995972.1, INSD:DR268027.1,INSD:ES100594.1,INSD:AV799814.1, INSD:BP582333.1,INSD:ES022186.1,INSD:DR268028.1, INSD:ES211817.1,INSD:AV566704.1,INSD:ES082905.1, INSD:ES014672.1,INSD:DR268032.1,INSD:DR268036.1, INSD:BP576964.1,INSD:EL265880.1,INSD:ES199344.1, INSD:BP816897.1,INSD:ES011253.1,INSD:EH945243.1, INSD:ES071763.1,INSD:EH877967.1,INSD:DR268035.1, INSD:BP578662.1,INSD:EL207235.1,INSD:ES155028.1, INSD:BP664849.1,INSD:EL014844.1,INSD:AV790072.1, INSD:EL258767.1,INSD:ES034217.1,INSD:EL982215.1, INSD:DR268033.1,INSD:DR268029.1,INSD:BP586196.1, INSD:CF774050.1,INSD:BP778625.1,INSD:AV559700.1, INSD:BP594105.1,INSD:ES049999.1,INSD:AV813438.1, INSD:ES041149.1,INSD:Z25685.1,INSD:EL272228.1, INSD:ES054421.1,INSD:AV558743.1,INSD:ES005341.1, INSD:EL012415.1,INSD:DR268026.1,INSD:EH993872.1, INSD:ES099398.1,INSD:F14024.1,INSD:BX834203.1, INSD:DR268034.1,INSD:EL970203.1,INSD:AV531712.1, INSD:EH827697.1,INSD:AV556321.1,INSD:AV795693.1, INSD:EL245925.1,INSD:BP799584.1,INSD:ES122795.1, INSD:BP578564.1,INSD:EL105908.1" /inference="Similar to RNA sequence, mRNA:INSD:AY058845.1,INSD:AY079034.1" /note="HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT4G21150" /db_xref="Araport:AT4G21150" intron_pos 49:2 (1/18) intron_pos 114:0 (2/18) intron_pos 144:0 (3/18) intron_pos 165:0 (4/18) intron_pos 188:1 (5/18) intron_pos 210:0 (6/18) intron_pos 228:1 (7/18) intron_pos 269:0 (8/18) intron_pos 307:2 (9/18) intron_pos 331:0 (10/18) intron_pos 366:0 (11/18) intron_pos 396:0 (12/18) intron_pos 445:2 (13/18) intron_pos 483:0 (14/18) intron_pos 511:0 (15/18) intron_pos 538:0 (16/18) intron_pos 613:0 (17/18) intron_pos 654:0 (18/18) BEGIN 1 MMAGGNVRFL VLILAVAICG AASVFQPISD SHRSAALDVF VPVDGSYKSL EEAYEALKTL 61 EILGIDKKSD LSSKTCENVV KVLQSSSSTL KDAFYALNVN GILKCKIGEA GPKDIVSQLQ 121 AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP 181 ESSTFAAGLA YETLAGVISL APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD 241 ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL 301 ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS 361 VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE SAHEKVYITE AQTKVPIAAT 421 GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP 481 HQAFFKLKHE SQVEHIFLVK TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS 541 LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG 601 VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL 661 KALSLLGVFL LFVGHRTLSQ LASASNKLKS A //