LOCUS AEE84365.1 570 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FAD-binding Berberine family protein protein.
ACCESSION CP002687-3631
PROTEIN_ID AEE84365.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G20830"
/gene_synonym="F21C20.180"
/gene_synonym="F21C20_180"
/inference="Similar to RNA sequence,
EST:INSD:AV795264.1,INSD:EH867635.1,INSD:ES127517.1,
INSD:AV798664.1,INSD:EH957372.1,INSD:BE662991.1,
INSD:BX837516.1,INSD:AV795316.1,INSD:EG462415.1,
INSD:EG481223.1,INSD:EH867810.1,INSD:BP795979.1,
INSD:BE844853.1,INSD:EL242098.1,INSD:EG500182.1,
INSD:DR363659.1,INSD:EH805390.1,INSD:EH795798.1,
INSD:ES035413.1,INSD:AV547098.1,INSD:EH977034.1,
INSD:EL244374.1,INSD:EH991774.1,INSD:CB255041.1,
INSD:EG506192.1,INSD:EG458571.1,INSD:EG462416.1,
INSD:EL115588.1,INSD:BP834313.1,INSD:EL158708.1,
INSD:EH924804.1,INSD:EH949511.1,INSD:EH929131.1,
INSD:EG503210.1,INSD:EG441453.1,INSD:EG465663.1,
INSD:Z17771.1,INSD:AV441672.1,INSD:EG481221.1,
INSD:EL086511.1,INSD:EH856435.1,INSD:EH834067.1,
INSD:AV826837.1,INSD:BP790653.1,INSD:EL113478.1,
INSD:EH876094.1,INSD:EG440245.1,INSD:EL328226.1,
INSD:ES205145.1,INSD:EL306774.1,INSD:CB252604.1,
INSD:EL233194.1,INSD:EL196827.1,INSD:BP804089.1,
INSD:EG529308.1,INSD:EH855796.1,INSD:BP859968.1,
INSD:AV826612.1,INSD:ES103607.1,INSD:CB252574.1,
INSD:CB254170.1,INSD:EH865370.1,INSD:EH805315.1,
INSD:BP608060.1,INSD:EL338983.1,INSD:EL023006.1,
INSD:EH835671.1,INSD:AV544755.1,INSD:AV830630.1,
INSD:EL008410.1,INSD:BP794958.1,INSD:EL010619.1,
INSD:EG506207.1,INSD:EG503208.1,INSD:EL274955.1,
INSD:EL204008.1,INSD:EL121630.1,INSD:EG458572.1,
INSD:EL197015.1,INSD:CB185682.2,INSD:BE524968.1,
INSD:AV831238.1,INSD:CB258357.1,INSD:EL079184.1,
INSD:ES125249.1,INSD:EL117890.1,INSD:EH992270.1,
INSD:EL290759.1,INSD:BE528103.1,INSD:F14032.1,
INSD:EG500178.1,INSD:EL340571.1,INSD:EH819054.1,
INSD:EG441442.1,INSD:BE662935.1,INSD:AV553252.1,
INSD:CB252891.1,INSD:AV829378.1,INSD:EL204971.1,
INSD:EH870053.1,INSD:BP808655.1,INSD:BP865218.1,
INSD:EL335465.1,INSD:AV813175.1,INSD:EG465664.1,
INSD:BP847281.2,INSD:CB255399.1,INSD:BP867827.1,
INSD:EG440246.1,INSD:EH823746.1,INSD:BP832461.1,
INSD:BP804980.1,INSD:EL151457.1,INSD:EH947471.1,
INSD:AB015126.2"
/inference="Similar to RNA sequence,
mRNA:INSD:AF083756.1,INSD:BX827481.1"
/note="FAD-binding Berberine family protein; FUNCTIONS IN:
electron carrier activity, oxidoreductase activity, FAD
binding, catalytic activity; INVOLVED IN: response to
oxidative stress; LOCATED IN: mitochondrion, apoplast,
plasma membrane, vacuole, plant-type cell wall; EXPRESSED
IN: 26 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2
(InterPro:IPR016166), Berberine/berberine-like
(InterPro:IPR012951), FAD linked oxidase, N-terminal
(InterPro:IPR006094); BEST Arabidopsis thaliana protein
match is: FAD-binding Berberine family protein
(TAIR:AT4G20840.1); Has 4327 Blast hits to 4201 proteins
in 643 species: Archae - 38; Bacteria - 1800; Metazoa - 2;
Fungi - 1615; Plants - 732; Viruses - 0; Other Eukaryotes
- 140 (source: NCBI BLink)."
/db_xref="TAIR:AT4G20830"
/db_xref="Araport:AT4G20830"
intron_pos 538:1 (1/1)
BEGIN
1 MLTTPPRTFV SVPFFFFFLL FLSLPLSSFS QSNSVYNSFL KCFSDKTKSP QSQITDNVFS
61 QTNPAFSSVL RAYIRNARFN TSSTLKPTII ITPRSESHVS AAVTCSKTLN FLLKIRSGGH
121 DYDGLSYISD KPFFILDMSN IRDVSVDIAS NSAWISAGAT LGEVYYRIWE KSRVHGFPAG
181 VCPTVGVGGH LSGGGYGNMV RKFGLSVDYV EDAKIVDVNG RVLDRKAMGE DLFWAITGGG
241 GGSYGVVLGY KVKLVPVPSV VTVFRVEQYM DSGAVDMVHK WQSVGPKTDP NLFMRMLIQP
301 VTRKKVKTVR ASVVALFLGR ADEVVALLSK EFPELGLKKE NCSEMTWFQS ALWWDNRLNA
361 TQVDPKVFLD RNLDTSSFGK RKSDYVATAI PKKGIESLFK KMIELGKIGL VFNPYGGKMA
421 EVAVNAKPFP HRNKLFKIQY SVNWKENSAE IEKGYLNQAK VLYSFMTGFV SKNPRSSYFN
481 YRDVDIGVND HGANSYKEGE VYGRKYFGEN FDRLVKIKTA VDPGNFFRNE QSIPTLKNEK
541 GMLLPEPGKA RRWSRVGGAT VVATVVLHVF
//