LOCUS AEE84365.1 570 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana FAD-binding Berberine family protein protein. ACCESSION CP002687-3631 PROTEIN_ID AEE84365.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G20830" /gene_synonym="F21C20.180" /gene_synonym="F21C20_180" /inference="Similar to RNA sequence, EST:INSD:AV795264.1,INSD:EH867635.1,INSD:ES127517.1, INSD:AV798664.1,INSD:EH957372.1,INSD:BE662991.1, INSD:BX837516.1,INSD:AV795316.1,INSD:EG462415.1, INSD:EG481223.1,INSD:EH867810.1,INSD:BP795979.1, INSD:BE844853.1,INSD:EL242098.1,INSD:EG500182.1, INSD:DR363659.1,INSD:EH805390.1,INSD:EH795798.1, INSD:ES035413.1,INSD:AV547098.1,INSD:EH977034.1, INSD:EL244374.1,INSD:EH991774.1,INSD:CB255041.1, INSD:EG506192.1,INSD:EG458571.1,INSD:EG462416.1, INSD:EL115588.1,INSD:BP834313.1,INSD:EL158708.1, INSD:EH924804.1,INSD:EH949511.1,INSD:EH929131.1, INSD:EG503210.1,INSD:EG441453.1,INSD:EG465663.1, INSD:Z17771.1,INSD:AV441672.1,INSD:EG481221.1, INSD:EL086511.1,INSD:EH856435.1,INSD:EH834067.1, INSD:AV826837.1,INSD:BP790653.1,INSD:EL113478.1, INSD:EH876094.1,INSD:EG440245.1,INSD:EL328226.1, INSD:ES205145.1,INSD:EL306774.1,INSD:CB252604.1, INSD:EL233194.1,INSD:EL196827.1,INSD:BP804089.1, INSD:EG529308.1,INSD:EH855796.1,INSD:BP859968.1, INSD:AV826612.1,INSD:ES103607.1,INSD:CB252574.1, INSD:CB254170.1,INSD:EH865370.1,INSD:EH805315.1, INSD:BP608060.1,INSD:EL338983.1,INSD:EL023006.1, INSD:EH835671.1,INSD:AV544755.1,INSD:AV830630.1, INSD:EL008410.1,INSD:BP794958.1,INSD:EL010619.1, INSD:EG506207.1,INSD:EG503208.1,INSD:EL274955.1, INSD:EL204008.1,INSD:EL121630.1,INSD:EG458572.1, INSD:EL197015.1,INSD:CB185682.2,INSD:BE524968.1, INSD:AV831238.1,INSD:CB258357.1,INSD:EL079184.1, INSD:ES125249.1,INSD:EL117890.1,INSD:EH992270.1, INSD:EL290759.1,INSD:BE528103.1,INSD:F14032.1, INSD:EG500178.1,INSD:EL340571.1,INSD:EH819054.1, INSD:EG441442.1,INSD:BE662935.1,INSD:AV553252.1, INSD:CB252891.1,INSD:AV829378.1,INSD:EL204971.1, INSD:EH870053.1,INSD:BP808655.1,INSD:BP865218.1, INSD:EL335465.1,INSD:AV813175.1,INSD:EG465664.1, INSD:BP847281.2,INSD:CB255399.1,INSD:BP867827.1, INSD:EG440246.1,INSD:EH823746.1,INSD:BP832461.1, INSD:BP804980.1,INSD:EL151457.1,INSD:EH947471.1, INSD:AB015126.2" /inference="Similar to RNA sequence, mRNA:INSD:AF083756.1,INSD:BX827481.1" /note="FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion, apoplast, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20840.1); Has 4327 Blast hits to 4201 proteins in 643 species: Archae - 38; Bacteria - 1800; Metazoa - 2; Fungi - 1615; Plants - 732; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink)." /db_xref="TAIR:AT4G20830" /db_xref="Araport:AT4G20830" intron_pos 538:1 (1/1) BEGIN 1 MLTTPPRTFV SVPFFFFFLL FLSLPLSSFS QSNSVYNSFL KCFSDKTKSP QSQITDNVFS 61 QTNPAFSSVL RAYIRNARFN TSSTLKPTII ITPRSESHVS AAVTCSKTLN FLLKIRSGGH 121 DYDGLSYISD KPFFILDMSN IRDVSVDIAS NSAWISAGAT LGEVYYRIWE KSRVHGFPAG 181 VCPTVGVGGH LSGGGYGNMV RKFGLSVDYV EDAKIVDVNG RVLDRKAMGE DLFWAITGGG 241 GGSYGVVLGY KVKLVPVPSV VTVFRVEQYM DSGAVDMVHK WQSVGPKTDP NLFMRMLIQP 301 VTRKKVKTVR ASVVALFLGR ADEVVALLSK EFPELGLKKE NCSEMTWFQS ALWWDNRLNA 361 TQVDPKVFLD RNLDTSSFGK RKSDYVATAI PKKGIESLFK KMIELGKIGL VFNPYGGKMA 421 EVAVNAKPFP HRNKLFKIQY SVNWKENSAE IEKGYLNQAK VLYSFMTGFV SKNPRSSYFN 481 YRDVDIGVND HGANSYKEGE VYGRKYFGEN FDRLVKIKTA VDPGNFFRNE QSIPTLKNEK 541 GMLLPEPGKA RRWSRVGGAT VVATVVLHVF //