LOCUS AEE83625.1 717 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Deoxyxylulose-5-phosphate synthase protein.
ACCESSION CP002687-2542
PROTEIN_ID AEE83625.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="CLA1"
/locus_tag="AT4G15560"
/gene_synonym="1-deoxy-D-xylulose 5-phosphate (DXP)
synthase 1"
/gene_synonym="1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE"
/gene_synonym="1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2"
/gene_synonym="AtCLA1"
/gene_synonym="CLA"
/gene_synonym="CLOROPLASTOS ALTERADOS 1"
/gene_synonym="DEF"
/gene_synonym="DL3821W"
/gene_synonym="DXPS2"
/gene_synonym="DXS"
/gene_synonym="DXS1"
/gene_synonym="FCAALL.24"
/inference="Similar to RNA sequence,
EST:INSD:EL057577.1,INSD:EL220773.1,INSD:AV521837.1,
INSD:AV522863.1,INSD:AV528131.1,INSD:EH959906.1,
INSD:CK118595.1,INSD:EL024974.1,INSD:EL098600.1,
INSD:BP609787.1,INSD:EL157818.1,INSD:EL303921.1,
INSD:AV796990.1,INSD:EG524185.1,INSD:DR195554.1,
INSD:EH913840.1,INSD:EH945024.1,INSD:EH879177.1,
INSD:ES149860.1,INSD:BP636715.1,INSD:AV529165.1,
INSD:BP600946.1,INSD:EL085790.1,INSD:AV799768.1,
INSD:BP788858.1,INSD:N96015.1,INSD:EH820637.1,
INSD:AV557962.1,INSD:BP785685.1,INSD:DR255758.1,
INSD:BP816560.1,INSD:EH814262.1,INSD:EL216315.1,
INSD:AV830584.1,INSD:EL014584.1,INSD:EH946774.1,
INSD:ES175550.1,INSD:EH798660.1,INSD:ES051073.1,
INSD:EH939158.1,INSD:EL103122.1,INSD:EH910683.1,
INSD:EL239127.1,INSD:EG524117.1,INSD:EH863156.1,
INSD:EL970677.1,INSD:ES057019.1,INSD:EH869821.1,
INSD:CK118412.1,INSD:EL014692.1,INSD:BP600666.1,
INSD:EH829590.1,INSD:AV523142.1,INSD:BP595294.1,
INSD:EH815287.1,INSD:AV803371.1,INSD:EH894131.1,
INSD:BP778914.1,INSD:CD531870.1,INSD:ES133421.1,
INSD:EH835000.1,INSD:EL168319.1,INSD:EL165397.1,
INSD:EH946830.1,INSD:AV545849.1,INSD:AV555162.1,
INSD:ES198429.1,INSD:EH989089.1,INSD:BP792313.1,
INSD:BP784859.1,INSD:BP789696.1,INSD:EG480747.1,
INSD:EL232984.1,INSD:EL205172.1,INSD:EG524176.1,
INSD:EL103706.1,INSD:BP786334.1,INSD:EL284992.1,
INSD:AV816681.1,INSD:EG524209.1,INSD:EH868798.1,
INSD:EG521530.1,INSD:BP806129.1,INSD:BP785253.1,
INSD:ES049746.1,INSD:BP604217.1,INSD:EL049259.1,
INSD:EH876546.1,INSD:BP807690.1,INSD:EL104254.1,
INSD:BP811196.1,INSD:ES155039.1,INSD:EL171440.1,
INSD:EL299821.1,INSD:EL305595.1,INSD:BP777545.1,
INSD:EH924199.1,INSD:EL160045.1,INSD:EL096062.1,
INSD:AV523898.1,INSD:EL137936.1,INSD:DR195552.1,
INSD:EH981685.1,INSD:EL201470.1,INSD:EL088712.1,
INSD:ES148190.1,INSD:EL277545.1,INSD:EL164598.1,
INSD:EH914179.1,INSD:EL186110.1,INSD:EL046002.1,
INSD:BP788655.1,INSD:EH805099.1,INSD:EG524208.1,
INSD:AV524042.1,INSD:EG496260.1,INSD:AV556482.1,
INSD:BP648315.1,INSD:DR255759.1,INSD:AV518596.1,
INSD:EH812682.1,INSD:AV558428.1,INSD:EH830132.1,
INSD:AV554847.1,INSD:EL042218.1,INSD:CF773053.1,
INSD:EH858558.1,INSD:BP781042.1,INSD:EH878383.1,
INSD:BP599742.1,INSD:BP595055.1,INSD:BP830616.1,
INSD:DR195553.1,INSD:EH932266.1,INSD:EL162859.1,
INSD:BP780439.1,INSD:DR375965.1,INSD:EH915033.1,
INSD:EG524195.1,INSD:EL266765.1,INSD:EL125729.1,
INSD:DR255760.1,INSD:ES110892.1,INSD:AV523922.1,
INSD:DR255762.1,INSD:EL997771.1,INSD:ES114183.1,
INSD:EH993521.1,INSD:AV793487.1,INSD:DR255757.1,
INSD:EH946179.1,INSD:EL237767.1,INSD:EH822839.1,
INSD:AV794459.1,INSD:EL018759.1,INSD:ES110704.1,
INSD:ES019292.1,INSD:EH849253.1,INSD:ES138363.1,
INSD:BP603227.1,INSD:EH918150.1,INSD:BP586737.1,
INSD:EH821613.1,INSD:ES117496.1,INSD:EL062448.1,
INSD:EL233013.1,INSD:EH894424.1,INSD:EL226223.1,
INSD:BP603693.1,INSD:AV782179.1,INSD:AV792815.1,
INSD:BP816767.1,INSD:EH882050.1,INSD:BP777991.1,
INSD:EL256226.1,INSD:W43562.1,INSD:ES058095.1,
INSD:AV528752.1,INSD:DR363492.1,INSD:EL054209.1,
INSD:EH902143.1,INSD:ES149067.1,INSD:EG524207.1,
INSD:ES071404.1,INSD:BP809129.1,INSD:BP598687.1,
INSD:EH883199.1,INSD:ES058479.1,INSD:ES005000.1,
INSD:EH852889.1,INSD:EH862233.1,INSD:AV812165.1,
INSD:EL121381.1,INSD:EH913473.1,INSD:AW004332.1,
INSD:EL274753.1,INSD:EL299022.1,INSD:EG496264.1,
INSD:AV540917.1,INSD:EH859670.1,INSD:EH927531.1,
INSD:EL183719.1,INSD:EH991667.1,INSD:EH828626.1,
INSD:EH900214.1,INSD:BP827477.1,INSD:EL082405.1,
INSD:BP588811.1,INSD:EG524181.1,INSD:BP790274.1,
INSD:EG521986.1,INSD:EG499993.1,INSD:EL105132.1,
INSD:EH796137.1,INSD:BP787152.1,INSD:EL060848.1,
INSD:EH965100.1,INSD:EL268737.1,INSD:EL198232.1,
INSD:ES158925.1,INSD:EH904892.1,INSD:ES000553.1,
INSD:EG524179.1,INSD:EL337393.1,INSD:BP562900.2,
INSD:EL286937.1,INSD:AV440297.1,INSD:EL149504.1,
INSD:BP618927.1,INSD:EL145543.1,INSD:DR255761.1,
INSD:AV522638.1,INSD:AV525961.1,INSD:EL257487.1,
INSD:EH985542.1,INSD:EH860347.1,INSD:EH819073.1,
INSD:DR255756.1,INSD:BP587848.1,INSD:EL116074.1,
INSD:BP781252.1,INSD:EH925730.1,INSD:EL307531.1,
INSD:ES116833.1,INSD:ES215091.1,INSD:EH834154.1,
INSD:EL046256.1,INSD:AI997953.1,INSD:EL059950.1,
INSD:EL319098.1,INSD:EL330196.1,INSD:EL105766.1,
INSD:EL043773.1,INSD:EG480745.1,INSD:EL154539.1,
INSD:EG524119.1,INSD:EG521531.1,INSD:EL264450.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY034917.1,INSD:U27099.1,INSD:BT002340.1,
INSD:AF428463.1,INSD:Y14333.1"
/note="CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN:
1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED
IN: chlorophyll biosynthetic process, response to light
stimulus, isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway; LOCATED IN: chloroplast;
EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Transketolase,
N-terminal (InterPro:IPR005474), Transketolase, C-terminal
(InterPro:IPR005476), Transketolase,
C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
(InterPro:IPR009014), Transketolase-like,
pyrimidine-binding domain (InterPro:IPR005475),
Transketolase binding site (InterPro:IPR020826),
Transketolase-like, C-terminal (InterPro:IPR015941),
Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477),
Dehydrogenase, E1 component (InterPro:IPR001017); BEST
Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose
5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast
hits to 24392 proteins in 2940 species: Archae - 267;
Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants -
446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G15560"
/db_xref="Araport:AT4G15560"
intron_pos 51:0 (1/8)
intron_pos 93:0 (2/8)
intron_pos 198:1 (3/8)
intron_pos 289:0 (4/8)
intron_pos 380:1 (5/8)
intron_pos 483:0 (6/8)
intron_pos 577:0 (7/8)
intron_pos 672:0 (8/8)
BEGIN
1 MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS
61 LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE LRSDVIFNVS KTGGHLGSSL
121 GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE
181 HDCFGTGHSS TTISAGLGMA VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM
241 IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301 LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV
361 VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS YTTYFAEALV AEAEVDKDVV
421 AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY
481 DQVVHDVDLQ KLPVRFAMDR AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM
541 VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601 CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL
661 ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH IAATALNLIG APREALF
//