LOCUS AEE83625.1 717 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Deoxyxylulose-5-phosphate synthase protein. ACCESSION CP002687-2542 PROTEIN_ID AEE83625.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="CLA1" /locus_tag="AT4G15560" /gene_synonym="1-deoxy-D-xylulose 5-phosphate (DXP) synthase 1" /gene_synonym="1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE" /gene_synonym="1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2" /gene_synonym="AtCLA1" /gene_synonym="CLA" /gene_synonym="CLOROPLASTOS ALTERADOS 1" /gene_synonym="DEF" /gene_synonym="DL3821W" /gene_synonym="DXPS2" /gene_synonym="DXS" /gene_synonym="DXS1" /gene_synonym="FCAALL.24" /inference="Similar to RNA sequence, EST:INSD:EL057577.1,INSD:EL220773.1,INSD:AV521837.1, INSD:AV522863.1,INSD:AV528131.1,INSD:EH959906.1, INSD:CK118595.1,INSD:EL024974.1,INSD:EL098600.1, INSD:BP609787.1,INSD:EL157818.1,INSD:EL303921.1, INSD:AV796990.1,INSD:EG524185.1,INSD:DR195554.1, INSD:EH913840.1,INSD:EH945024.1,INSD:EH879177.1, INSD:ES149860.1,INSD:BP636715.1,INSD:AV529165.1, INSD:BP600946.1,INSD:EL085790.1,INSD:AV799768.1, INSD:BP788858.1,INSD:N96015.1,INSD:EH820637.1, INSD:AV557962.1,INSD:BP785685.1,INSD:DR255758.1, INSD:BP816560.1,INSD:EH814262.1,INSD:EL216315.1, INSD:AV830584.1,INSD:EL014584.1,INSD:EH946774.1, INSD:ES175550.1,INSD:EH798660.1,INSD:ES051073.1, INSD:EH939158.1,INSD:EL103122.1,INSD:EH910683.1, INSD:EL239127.1,INSD:EG524117.1,INSD:EH863156.1, INSD:EL970677.1,INSD:ES057019.1,INSD:EH869821.1, INSD:CK118412.1,INSD:EL014692.1,INSD:BP600666.1, INSD:EH829590.1,INSD:AV523142.1,INSD:BP595294.1, INSD:EH815287.1,INSD:AV803371.1,INSD:EH894131.1, INSD:BP778914.1,INSD:CD531870.1,INSD:ES133421.1, INSD:EH835000.1,INSD:EL168319.1,INSD:EL165397.1, INSD:EH946830.1,INSD:AV545849.1,INSD:AV555162.1, INSD:ES198429.1,INSD:EH989089.1,INSD:BP792313.1, INSD:BP784859.1,INSD:BP789696.1,INSD:EG480747.1, INSD:EL232984.1,INSD:EL205172.1,INSD:EG524176.1, INSD:EL103706.1,INSD:BP786334.1,INSD:EL284992.1, INSD:AV816681.1,INSD:EG524209.1,INSD:EH868798.1, INSD:EG521530.1,INSD:BP806129.1,INSD:BP785253.1, INSD:ES049746.1,INSD:BP604217.1,INSD:EL049259.1, INSD:EH876546.1,INSD:BP807690.1,INSD:EL104254.1, INSD:BP811196.1,INSD:ES155039.1,INSD:EL171440.1, INSD:EL299821.1,INSD:EL305595.1,INSD:BP777545.1, INSD:EH924199.1,INSD:EL160045.1,INSD:EL096062.1, INSD:AV523898.1,INSD:EL137936.1,INSD:DR195552.1, INSD:EH981685.1,INSD:EL201470.1,INSD:EL088712.1, INSD:ES148190.1,INSD:EL277545.1,INSD:EL164598.1, INSD:EH914179.1,INSD:EL186110.1,INSD:EL046002.1, INSD:BP788655.1,INSD:EH805099.1,INSD:EG524208.1, INSD:AV524042.1,INSD:EG496260.1,INSD:AV556482.1, INSD:BP648315.1,INSD:DR255759.1,INSD:AV518596.1, INSD:EH812682.1,INSD:AV558428.1,INSD:EH830132.1, INSD:AV554847.1,INSD:EL042218.1,INSD:CF773053.1, INSD:EH858558.1,INSD:BP781042.1,INSD:EH878383.1, INSD:BP599742.1,INSD:BP595055.1,INSD:BP830616.1, INSD:DR195553.1,INSD:EH932266.1,INSD:EL162859.1, INSD:BP780439.1,INSD:DR375965.1,INSD:EH915033.1, INSD:EG524195.1,INSD:EL266765.1,INSD:EL125729.1, INSD:DR255760.1,INSD:ES110892.1,INSD:AV523922.1, INSD:DR255762.1,INSD:EL997771.1,INSD:ES114183.1, INSD:EH993521.1,INSD:AV793487.1,INSD:DR255757.1, INSD:EH946179.1,INSD:EL237767.1,INSD:EH822839.1, INSD:AV794459.1,INSD:EL018759.1,INSD:ES110704.1, INSD:ES019292.1,INSD:EH849253.1,INSD:ES138363.1, INSD:BP603227.1,INSD:EH918150.1,INSD:BP586737.1, INSD:EH821613.1,INSD:ES117496.1,INSD:EL062448.1, INSD:EL233013.1,INSD:EH894424.1,INSD:EL226223.1, INSD:BP603693.1,INSD:AV782179.1,INSD:AV792815.1, INSD:BP816767.1,INSD:EH882050.1,INSD:BP777991.1, INSD:EL256226.1,INSD:W43562.1,INSD:ES058095.1, INSD:AV528752.1,INSD:DR363492.1,INSD:EL054209.1, INSD:EH902143.1,INSD:ES149067.1,INSD:EG524207.1, INSD:ES071404.1,INSD:BP809129.1,INSD:BP598687.1, INSD:EH883199.1,INSD:ES058479.1,INSD:ES005000.1, INSD:EH852889.1,INSD:EH862233.1,INSD:AV812165.1, INSD:EL121381.1,INSD:EH913473.1,INSD:AW004332.1, INSD:EL274753.1,INSD:EL299022.1,INSD:EG496264.1, INSD:AV540917.1,INSD:EH859670.1,INSD:EH927531.1, INSD:EL183719.1,INSD:EH991667.1,INSD:EH828626.1, INSD:EH900214.1,INSD:BP827477.1,INSD:EL082405.1, INSD:BP588811.1,INSD:EG524181.1,INSD:BP790274.1, INSD:EG521986.1,INSD:EG499993.1,INSD:EL105132.1, INSD:EH796137.1,INSD:BP787152.1,INSD:EL060848.1, INSD:EH965100.1,INSD:EL268737.1,INSD:EL198232.1, INSD:ES158925.1,INSD:EH904892.1,INSD:ES000553.1, INSD:EG524179.1,INSD:EL337393.1,INSD:BP562900.2, INSD:EL286937.1,INSD:AV440297.1,INSD:EL149504.1, INSD:BP618927.1,INSD:EL145543.1,INSD:DR255761.1, INSD:AV522638.1,INSD:AV525961.1,INSD:EL257487.1, INSD:EH985542.1,INSD:EH860347.1,INSD:EH819073.1, INSD:DR255756.1,INSD:BP587848.1,INSD:EL116074.1, INSD:BP781252.1,INSD:EH925730.1,INSD:EL307531.1, INSD:ES116833.1,INSD:ES215091.1,INSD:EH834154.1, INSD:EL046256.1,INSD:AI997953.1,INSD:EL059950.1, INSD:EL319098.1,INSD:EL330196.1,INSD:EL105766.1, INSD:EL043773.1,INSD:EG480745.1,INSD:EL154539.1, INSD:EG524119.1,INSD:EG521531.1,INSD:EL264450.1" /inference="Similar to RNA sequence, mRNA:INSD:AY034917.1,INSD:U27099.1,INSD:BT002340.1, INSD:AF428463.1,INSD:Y14333.1" /note="CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink)." /db_xref="TAIR:AT4G15560" /db_xref="Araport:AT4G15560" intron_pos 51:0 (1/8) intron_pos 93:0 (2/8) intron_pos 198:1 (3/8) intron_pos 289:0 (4/8) intron_pos 380:1 (5/8) intron_pos 483:0 (6/8) intron_pos 577:0 (7/8) intron_pos 672:0 (8/8) BEGIN 1 MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS 61 LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE LRSDVIFNVS KTGGHLGSSL 121 GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE 181 HDCFGTGHSS TTISAGLGMA VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM 241 IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ 301 LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV 361 VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS YTTYFAEALV AEAEVDKDVV 421 AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY 481 DQVVHDVDLQ KLPVRFAMDR AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM 541 VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS 601 CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL 661 ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH IAATALNLIG APREALF //