LOCUS AEE83393.1 566 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phytoene desaturase 3 protein.
ACCESSION CP002687-2181
PROTEIN_ID AEE83393.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PDS3"
/locus_tag="AT4G14210"
/gene_synonym="DL3145C"
/gene_synonym="FCAALL.28"
/gene_synonym="PDE226"
/gene_synonym="PDS"
/gene_synonym="PHYTOENE DESATURASE"
/gene_synonym="phytoene desaturase 3"
/gene_synonym="PIGMENT DEFECTIVE 226"
/inference="Similar to RNA sequence,
EST:INSD:AV522473.1,INSD:AV812635.1,INSD:DR262075.1,
INSD:BP586845.1,INSD:EL162010.1,INSD:DR262072.1,
INSD:BP630351.1,INSD:DR262062.1,INSD:ES184244.1,
INSD:EH858216.1,INSD:DR262073.1,INSD:BP795302.1,
INSD:EL281078.1,INSD:EL324450.1,INSD:DR242303.1,
INSD:BP778239.1,INSD:BP628644.1,INSD:BP790846.1,
INSD:EL326138.1,INSD:DR356083.1,INSD:DR262074.1,
INSD:DR262060.1,INSD:EH861361.1,INSD:DR262061.1,
INSD:DR249217.1,INSD:BP589521.1,INSD:BP806935.1,
INSD:BP578134.1,INSD:DR262076.1,INSD:DR262068.1,
INSD:BP670302.1,INSD:AV830695.1,INSD:DR356082.1,
INSD:DR262058.1,INSD:EL068271.1,INSD:AV794770.1,
INSD:BP562088.1,INSD:BP785462.1,INSD:ES183007.1,
INSD:EH911038.1,INSD:ES206075.1,INSD:DR262065.1,
INSD:ES160620.1,INSD:DR262078.1,INSD:AV441491.1,
INSD:DR262057.1,INSD:BP668705.1,INSD:BP786474.1,
INSD:BP590538.1,INSD:DR262069.1,INSD:EG516388.1,
INSD:AV827641.1,INSD:DR356084.1,INSD:EL136528.1,
INSD:DR262071.1,INSD:DR262063.1,INSD:ES158974.1,
INSD:BP790109.1,INSD:EH820658.1,INSD:EL271544.1,
INSD:BP851614.1,INSD:AV798858.1,INSD:BP666166.1,
INSD:EH825624.1,INSD:EH814674.1,INSD:DR262067.1,
INSD:EL078856.1,INSD:AV798386.1,INSD:EH843571.1,
INSD:EL184950.1,INSD:DR262077.1,INSD:DR262064.1,
INSD:DR262070.1,INSD:EL075293.1,INSD:BP627377.1,
INSD:ES142687.1,INSD:DR262066.1,INSD:BP783776.1,
INSD:BP784504.1,INSD:EH812485.1,INSD:EH982094.1,
INSD:BP629610.1,INSD:AV799749.1,INSD:BP803393.2,
INSD:EL007708.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX828664.1"
/note="phytoene desaturase 3 (PDS3); FUNCTIONS IN:
phytoene dehydrogenase activity; INVOLVED IN: carotenoid
biosynthetic process, carotene biosynthetic process;
LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Amine oxidase
(InterPro:IPR002937), Phytoene desaturase
(InterPro:IPR014102); BEST Arabidopsis thaliana protein
match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has
4307 Blast hits to 4306 proteins in 952 species: Archae -
70; Bacteria - 2299; Metazoa - 368; Fungi - 90; Plants -
493; Viruses - 0; Other Eukaryotes - 987 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G14210"
/db_xref="Araport:AT4G14210"
intron_pos 57:0 (1/13)
intron_pos 101:1 (2/13)
intron_pos 131:0 (3/13)
intron_pos 150:1 (4/13)
intron_pos 202:1 (5/13)
intron_pos 252:0 (6/13)
intron_pos 292:0 (7/13)
intron_pos 363:1 (8/13)
intron_pos 397:2 (9/13)
intron_pos 413:2 (10/13)
intron_pos 429:0 (11/13)
intron_pos 491:2 (12/13)
intron_pos 546:0 (13/13)
BEGIN
1 MVVFGNVSAA NLPYQNGFLE ALSSGGCELM GHSFRVPTSQ ALKTRTRRRS TAGPLQVVCV
61 DIPRPELENT VNFLEAASLS ASFRSAPRPA KPLKVVIAGA GLAGLSTAKY LADAGHKPLL
121 LEARDVLGGK IAAWKDEDGD WYETGLHIFF GAYPNVQNLF GELGINDRLQ WKEHSMIFAM
181 PSKPGEFSRF DFPDVLPAPL NGIWAILRNN EMLTWPEKIK FAIGLLPAMV GGQAYVEAQD
241 GLSVKEWMEK QGVPERVTDE VFIAMSKALN FINPDELSMQ CILIALNRFL QEKHGSKMAF
301 LDGNPPERLC MPVVDHIRSL GGEVQLNSRI KKIELNDDGT VKSFLLTNGS TVEGDAYVFA
361 APVDILKLLL PDPWKEIPYF KKLDKLVGVP VINVHIWFDR KLKNTYDHLL FSRSNLLSVY
421 ADMSLTCKEY YDPNRSMLEL VFAPAEEWIS RTDSDIIDAT MKELEKLFPD EISADQSKAK
481 ILKYHVVKTP RSVYKTIPNC EPCRPLQRSP IEGFYLAGDY TKQKYLASME GAVLSGKFCS
541 QSIVQDYELL AASGPRKLSE ATVSSS
//