LOCUS AEE83393.1 566 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana phytoene desaturase 3 protein. ACCESSION CP002687-2181 PROTEIN_ID AEE83393.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="PDS3" /locus_tag="AT4G14210" /gene_synonym="DL3145C" /gene_synonym="FCAALL.28" /gene_synonym="PDE226" /gene_synonym="PDS" /gene_synonym="PHYTOENE DESATURASE" /gene_synonym="phytoene desaturase 3" /gene_synonym="PIGMENT DEFECTIVE 226" /inference="Similar to RNA sequence, EST:INSD:AV522473.1,INSD:AV812635.1,INSD:DR262075.1, INSD:BP586845.1,INSD:EL162010.1,INSD:DR262072.1, INSD:BP630351.1,INSD:DR262062.1,INSD:ES184244.1, INSD:EH858216.1,INSD:DR262073.1,INSD:BP795302.1, INSD:EL281078.1,INSD:EL324450.1,INSD:DR242303.1, INSD:BP778239.1,INSD:BP628644.1,INSD:BP790846.1, INSD:EL326138.1,INSD:DR356083.1,INSD:DR262074.1, INSD:DR262060.1,INSD:EH861361.1,INSD:DR262061.1, INSD:DR249217.1,INSD:BP589521.1,INSD:BP806935.1, INSD:BP578134.1,INSD:DR262076.1,INSD:DR262068.1, INSD:BP670302.1,INSD:AV830695.1,INSD:DR356082.1, INSD:DR262058.1,INSD:EL068271.1,INSD:AV794770.1, INSD:BP562088.1,INSD:BP785462.1,INSD:ES183007.1, INSD:EH911038.1,INSD:ES206075.1,INSD:DR262065.1, INSD:ES160620.1,INSD:DR262078.1,INSD:AV441491.1, INSD:DR262057.1,INSD:BP668705.1,INSD:BP786474.1, INSD:BP590538.1,INSD:DR262069.1,INSD:EG516388.1, INSD:AV827641.1,INSD:DR356084.1,INSD:EL136528.1, INSD:DR262071.1,INSD:DR262063.1,INSD:ES158974.1, INSD:BP790109.1,INSD:EH820658.1,INSD:EL271544.1, INSD:BP851614.1,INSD:AV798858.1,INSD:BP666166.1, INSD:EH825624.1,INSD:EH814674.1,INSD:DR262067.1, INSD:EL078856.1,INSD:AV798386.1,INSD:EH843571.1, INSD:EL184950.1,INSD:DR262077.1,INSD:DR262064.1, INSD:DR262070.1,INSD:EL075293.1,INSD:BP627377.1, INSD:ES142687.1,INSD:DR262066.1,INSD:BP783776.1, INSD:BP784504.1,INSD:EH812485.1,INSD:EH982094.1, INSD:BP629610.1,INSD:AV799749.1,INSD:BP803393.2, INSD:EL007708.1" /inference="Similar to RNA sequence, mRNA:INSD:BX828664.1" /note="phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 4307 Blast hits to 4306 proteins in 952 species: Archae - 70; Bacteria - 2299; Metazoa - 368; Fungi - 90; Plants - 493; Viruses - 0; Other Eukaryotes - 987 (source: NCBI BLink)." /db_xref="TAIR:AT4G14210" /db_xref="Araport:AT4G14210" intron_pos 57:0 (1/13) intron_pos 101:1 (2/13) intron_pos 131:0 (3/13) intron_pos 150:1 (4/13) intron_pos 202:1 (5/13) intron_pos 252:0 (6/13) intron_pos 292:0 (7/13) intron_pos 363:1 (8/13) intron_pos 397:2 (9/13) intron_pos 413:2 (10/13) intron_pos 429:0 (11/13) intron_pos 491:2 (12/13) intron_pos 546:0 (13/13) BEGIN 1 MVVFGNVSAA NLPYQNGFLE ALSSGGCELM GHSFRVPTSQ ALKTRTRRRS TAGPLQVVCV 61 DIPRPELENT VNFLEAASLS ASFRSAPRPA KPLKVVIAGA GLAGLSTAKY LADAGHKPLL 121 LEARDVLGGK IAAWKDEDGD WYETGLHIFF GAYPNVQNLF GELGINDRLQ WKEHSMIFAM 181 PSKPGEFSRF DFPDVLPAPL NGIWAILRNN EMLTWPEKIK FAIGLLPAMV GGQAYVEAQD 241 GLSVKEWMEK QGVPERVTDE VFIAMSKALN FINPDELSMQ CILIALNRFL QEKHGSKMAF 301 LDGNPPERLC MPVVDHIRSL GGEVQLNSRI KKIELNDDGT VKSFLLTNGS TVEGDAYVFA 361 APVDILKLLL PDPWKEIPYF KKLDKLVGVP VINVHIWFDR KLKNTYDHLL FSRSNLLSVY 421 ADMSLTCKEY YDPNRSMLEL VFAPAEEWIS RTDSDIIDAT MKELEKLFPD EISADQSKAK 481 ILKYHVVKTP RSVYKTIPNC EPCRPLQRSP IEGFYLAGDY TKQKYLASME GAVLSGKFCS 541 QSIVQDYELL AASGPRKLSE ATVSSS //