LOCUS AEE82269.1 913 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana sequence-specific DNA binding transcription
factor ATNDX protein.
ACCESSION CP002687-635
PROTEIN_ID AEE82269.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G03090"
/gene_synonym="AtNDX"
/gene_synonym="NDX"
/gene_synonym="Nodulin Homeobox"
/gene_synonym="T4I9.3"
/gene_synonym="T4I9_3"
/inference="Similar to RNA sequence,
EST:INSD:AV522965.1,INSD:AA597784.1,INSD:ES064577.1,
INSD:EH984121.1,INSD:DR364136.1,INSD:EH807078.1,
INSD:AV528860.1,INSD:AV559924.1,INSD:EL337461.1"
/note="sequence-specific DNA binding;sequence-specific DNA
binding transcription factors; FUNCTIONS IN:
sequence-specific DNA binding, sequence-specific DNA
binding transcription factor activity; INVOLVED IN:
regulation of transcription, DNA-dependent; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356);
Has 162 Blast hits to 148 proteins in 59 species: Archae -
0; Bacteria - 10; Metazoa - 30; Fungi - 10; Plants - 59;
Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink)."
/db_xref="TAIR:AT4G03090"
/db_xref="Araport:AT4G03090"
intron_pos 49:0 (1/14)
intron_pos 101:0 (2/14)
intron_pos 129:0 (3/14)
intron_pos 172:0 (4/14)
intron_pos 245:0 (5/14)
intron_pos 289:0 (6/14)
intron_pos 320:0 (7/14)
intron_pos 371:0 (8/14)
intron_pos 467:1 (9/14)
intron_pos 513:1 (10/14)
intron_pos 536:2 (11/14)
intron_pos 584:0 (12/14)
intron_pos 741:0 (13/14)
intron_pos 753:2 (14/14)
BEGIN
1 MVRLLQPKHM VQAVNALHWR NSVEFHKLLK DNGDFSICFN SEQVLPQKIS VEKMVKMLPR
61 HLIAVVMTPN KDGKSRYILC GIRLLQTLCD LTPRNAKLEQ VLLDDVKLSA QMIDLVILVI
121 IALGRNRKES CNSNKESLLE ATLVASCLHL FHGFISPNSQ DLVLVLLAHP RVDVFIDSAF
181 GAVLNVVISL KAKLLYRQTD SPKKLGASSV EEVNFHCQQA EAALQFLHSL CQHKPFRERV
241 AKNKELCGKG GVLRLAQSIL SLTITPEFVG ATVTIASTSR MKAKVLSILQ HLFEAESVSF
301 LDEVANAGNL HLAKTVASEV LKLLRLGLSK ASMATASPDY PMGFVLLNAM RLADVLTDDS
361 NFRSFFTEHF SMVLSAVFCL SHGDFLSMLC SSDLSSREDD ANVDYDLFKS AGWILSVFSS
421 SGQSVTPQFK LSLQNNLTMS SYAHQRTSLF IKMIANLHCF VPNVCQEQDR NRFIQNVMSG
481 LRKDPSSILI KMLPGSSYTP VAQRGTGVCR NLGSLLRHAE SLIPSSLNEE DFLLLRVFCD
541 QLQPLIHSEF EESQVQVKVK KLFALLYIGF TILWLICLVT LIQDIEGRGG NLSGKLKELL
601 NLNNEEASED CDVRVEGVMT KQGVNEEIDT VERLKESDAD ASNLETSGSD TSSNRGKGLV
661 EEGELVQNMS KRFKGSASGE VKEDEKSETF LVFEKQKKKR KRSIMNADQM GMIEKALAEE
721 PDLQRNSASR QLWADKISQK GSEVITSSQL KNWLNNRKAK LARANKQTGP AHDNNSSGDL
781 PESPGDENTW QQKPSTPIKD QTVTETPKTG ENLMRTSSSS EEGIKQGQQV RLMDERGDEI
841 GKGTVLRTDG EWNGLSLETR QICVVDVMEL SESYDGSKKM IPYGSDDVGR TFTEANSRFG
901 VMRVAWDVNK LQY
//