LOCUS AEE82269.1 913 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana sequence-specific DNA binding transcription factor ATNDX protein. ACCESSION CP002687-635 PROTEIN_ID AEE82269.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G03090" /gene_synonym="AtNDX" /gene_synonym="NDX" /gene_synonym="Nodulin Homeobox" /gene_synonym="T4I9.3" /gene_synonym="T4I9_3" /inference="Similar to RNA sequence, EST:INSD:AV522965.1,INSD:AA597784.1,INSD:ES064577.1, INSD:EH984121.1,INSD:DR364136.1,INSD:EH807078.1, INSD:AV528860.1,INSD:AV559924.1,INSD:EL337461.1" /note="sequence-specific DNA binding;sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); Has 162 Blast hits to 148 proteins in 59 species: Archae - 0; Bacteria - 10; Metazoa - 30; Fungi - 10; Plants - 59; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink)." /db_xref="TAIR:AT4G03090" /db_xref="Araport:AT4G03090" intron_pos 49:0 (1/14) intron_pos 101:0 (2/14) intron_pos 129:0 (3/14) intron_pos 172:0 (4/14) intron_pos 245:0 (5/14) intron_pos 289:0 (6/14) intron_pos 320:0 (7/14) intron_pos 371:0 (8/14) intron_pos 467:1 (9/14) intron_pos 513:1 (10/14) intron_pos 536:2 (11/14) intron_pos 584:0 (12/14) intron_pos 741:0 (13/14) intron_pos 753:2 (14/14) BEGIN 1 MVRLLQPKHM VQAVNALHWR NSVEFHKLLK DNGDFSICFN SEQVLPQKIS VEKMVKMLPR 61 HLIAVVMTPN KDGKSRYILC GIRLLQTLCD LTPRNAKLEQ VLLDDVKLSA QMIDLVILVI 121 IALGRNRKES CNSNKESLLE ATLVASCLHL FHGFISPNSQ DLVLVLLAHP RVDVFIDSAF 181 GAVLNVVISL KAKLLYRQTD SPKKLGASSV EEVNFHCQQA EAALQFLHSL CQHKPFRERV 241 AKNKELCGKG GVLRLAQSIL SLTITPEFVG ATVTIASTSR MKAKVLSILQ HLFEAESVSF 301 LDEVANAGNL HLAKTVASEV LKLLRLGLSK ASMATASPDY PMGFVLLNAM RLADVLTDDS 361 NFRSFFTEHF SMVLSAVFCL SHGDFLSMLC SSDLSSREDD ANVDYDLFKS AGWILSVFSS 421 SGQSVTPQFK LSLQNNLTMS SYAHQRTSLF IKMIANLHCF VPNVCQEQDR NRFIQNVMSG 481 LRKDPSSILI KMLPGSSYTP VAQRGTGVCR NLGSLLRHAE SLIPSSLNEE DFLLLRVFCD 541 QLQPLIHSEF EESQVQVKVK KLFALLYIGF TILWLICLVT LIQDIEGRGG NLSGKLKELL 601 NLNNEEASED CDVRVEGVMT KQGVNEEIDT VERLKESDAD ASNLETSGSD TSSNRGKGLV 661 EEGELVQNMS KRFKGSASGE VKEDEKSETF LVFEKQKKKR KRSIMNADQM GMIEKALAEE 721 PDLQRNSASR QLWADKISQK GSEVITSSQL KNWLNNRKAK LARANKQTGP AHDNNSSGDL 781 PESPGDENTW QQKPSTPIKD QTVTETPKTG ENLMRTSSSS EEGIKQGQQV RLMDERGDEI 841 GKGTVLRTDG EWNGLSLETR QICVVDVMEL SESYDGSKKM IPYGSDDVGR TFTEANSRFG 901 VMRVAWDVNK LQY //