LOCUS AEE78851.1 436 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana acyl-CoA oxidase 4 protein.
ACCESSION CP002686-7231
PROTEIN_ID AEE78851.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ACX4"
/locus_tag="AT3G51840"
/gene_synonym="acyl-CoA oxidase 4"
/gene_synonym="ATG6"
/gene_synonym="ATSCX"
/gene_synonym="SHORT-CHAIN ACYL COA OXIDASE"
/inference="Similar to RNA sequence,
EST:INSD:BP807334.1,INSD:EL318846.1,INSD:BP589304.1,
INSD:EL148602.1,INSD:EL090453.1,INSD:BP851353.1,
INSD:BP815706.1,INSD:BP652711.1,INSD:EL341841.1,
INSD:BP615506.1,INSD:BP605105.1,INSD:BP604276.1,
INSD:BP843899.1,INSD:DR233314.1,INSD:N95964.1,
INSD:BP859084.1,INSD:EL078588.1,INSD:EH987866.1,
INSD:BP578555.1,INSD:BP600632.1,INSD:BP808857.1,
INSD:BP562437.1,INSD:ES009267.1,INSD:EL332768.1,
INSD:BP590409.1,INSD:DR233308.1,INSD:EL135360.1,
INSD:EL019294.1,INSD:BP793301.1,INSD:EL140643.1,
INSD:BP600516.1,INSD:AV787091.1,INSD:BP609821.1,
INSD:DR233317.1,INSD:BP808771.1,INSD:DR233310.1,
INSD:AV800111.1,INSD:BP614366.1,INSD:BP779661.1,
INSD:BP865345.1,INSD:BP859533.1,INSD:BP811612.1,
INSD:AV808270.1,INSD:AA395575.1,INSD:BP668682.1,
INSD:DR233319.1,INSD:DR233316.1,INSD:BP788869.1,
INSD:DR233312.1,INSD:BP610354.1,INSD:BP809728.1,
INSD:BP597841.1,INSD:BP607777.1,INSD:BP587015.1,
INSD:EL229576.1,INSD:EH920419.1,INSD:BP835867.1,
INSD:BP613779.1,INSD:DR233309.1,INSD:DR233322.1,
INSD:BP616747.1,INSD:DR233321.1,INSD:ES092224.1,
INSD:AV794944.1,INSD:BP823387.1,INSD:BP621713.1,
INSD:BP616933.1,INSD:BP780104.1,INSD:BP829441.1,
INSD:BP814214.1,INSD:BP600531.1,INSD:DR233313.1,
INSD:BP857940.1,INSD:BP616708.1,INSD:BP602592.1,
INSD:BP633644.1,INSD:ES020504.1,INSD:EL102993.1,
INSD:BP667954.1,INSD:ES143510.1,INSD:EL196569.1,
INSD:EL283074.1,INSD:AA394456.1,INSD:BP645431.1,
INSD:BP599376.1,INSD:ES176735.1,INSD:AV808305.1,
INSD:ES048549.1,INSD:BP617167.1,INSD:EH848835.1,
INSD:EL164814.1,INSD:AV535217.1,INSD:BP668947.1,
INSD:BP605432.1,INSD:EL070321.1,INSD:BP596785.1,
INSD:H77217.1,INSD:EL035071.1,INSD:EL314243.1,
INSD:EL278145.1,INSD:BP615916.1,INSD:AA597968.1,
INSD:EH849099.1,INSD:EL251982.1,INSD:ES055204.1,
INSD:EH941430.1,INSD:BP659271.1,INSD:AV799325.1,
INSD:EH926445.1,INSD:AV824093.1,INSD:EH856441.1,
INSD:BP820233.1,INSD:ES170078.1,INSD:EH855329.1,
INSD:BP615812.1,INSD:BP854313.1,INSD:BP833279.1,
INSD:BP810386.1,INSD:BP838201.1,INSD:BP643697.1,
INSD:EL057193.1,INSD:BP594997.1,INSD:AA650785.1,
INSD:AA605563.1,INSD:AV534736.1,INSD:EH836581.1,
INSD:DR233318.1,INSD:CB259971.1,INSD:EL115337.1,
INSD:DR370614.1,INSD:BP779711.1,INSD:EL083748.1,
INSD:CB257798.1,INSD:BP620077.1,INSD:BP579005.1,
INSD:BP606887.1,INSD:ES188134.1,INSD:ES141774.1,
INSD:BP642121.1,INSD:AA040984.1,INSD:BP645879.1,
INSD:AV800006.1,INSD:EH963628.1,INSD:BP605787.1,
INSD:AV793706.1,INSD:AV783208.1,INSD:AV819488.1,
INSD:BP615168.1,INSD:BP577606.1,INSD:BP617890.1,
INSD:AV814731.1,INSD:EL208573.1,INSD:AV540693.1,
INSD:BP858249.1,INSD:DR233311.1,INSD:DR233320.1,
INSD:BP831137.1,INSD:EL064658.1,INSD:ES099315.1,
INSD:BP806995.1,INSD:EL117891.1,INSD:BP839121.1,
INSD:BP816220.1,INSD:DR233315.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK222131.1,INSD:AY125536.1,INSD:U72505.1,
INSD:AY094441.1,INSD:AY087793.1,INSD:AB017643.1"
/note="acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN:
oxidoreductase activity, acyl-CoA oxidase activity;
INVOLVED IN: fatty acid beta-oxidation, short-chain fatty
acid metabolic process, embryo development ending in seed
dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase,
type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA
oxidase/dehydrogenase, type 1 (InterPro:IPR006090),
Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100),
Acyl-CoA dehydrogenase/oxidase, N-terminal
(InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase,
central domain (InterPro:IPR006091), Acyl-CoA
dehydrogenase, conserved site (InterPro:IPR006089),
Acyl-CoA dehydrogenase/oxidase C-terminal
(InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal
(InterPro:IPR006092); BEST Arabidopsis thaliana protein
match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1);
Has 36828 Blast hits to 36765 proteins in 1995 species:
Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi -
822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301
(source: NCBI BLink)."
/db_xref="TAIR:AT3G51840"
/db_xref="Araport:AT3G51840"
intron_pos 10:1 (1/12)
intron_pos 45:1 (2/12)
intron_pos 81:0 (3/12)
intron_pos 107:0 (4/12)
intron_pos 148:1 (5/12)
intron_pos 173:0 (6/12)
intron_pos 193:0 (7/12)
intron_pos 229:2 (8/12)
intron_pos 283:0 (9/12)
intron_pos 308:2 (10/12)
intron_pos 366:0 (11/12)
intron_pos 397:0 (12/12)
BEGIN
1 MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ
61 AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV AGGSIKGYGC PGLSITANAI
121 ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG
181 SDASGLGTTA TKVEGGWKIN GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK
241 ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301 GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ
361 ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD LEPIYTYEGT YDINTLVTGR
421 EVTGIASFKP ATRSRL
//