LOCUS AEE78851.1 436 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana acyl-CoA oxidase 4 protein. ACCESSION CP002686-7231 PROTEIN_ID AEE78851.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /gene="ACX4" /locus_tag="AT3G51840" /gene_synonym="acyl-CoA oxidase 4" /gene_synonym="ATG6" /gene_synonym="ATSCX" /gene_synonym="SHORT-CHAIN ACYL COA OXIDASE" /inference="Similar to RNA sequence, EST:INSD:BP807334.1,INSD:EL318846.1,INSD:BP589304.1, INSD:EL148602.1,INSD:EL090453.1,INSD:BP851353.1, INSD:BP815706.1,INSD:BP652711.1,INSD:EL341841.1, INSD:BP615506.1,INSD:BP605105.1,INSD:BP604276.1, INSD:BP843899.1,INSD:DR233314.1,INSD:N95964.1, INSD:BP859084.1,INSD:EL078588.1,INSD:EH987866.1, INSD:BP578555.1,INSD:BP600632.1,INSD:BP808857.1, INSD:BP562437.1,INSD:ES009267.1,INSD:EL332768.1, INSD:BP590409.1,INSD:DR233308.1,INSD:EL135360.1, INSD:EL019294.1,INSD:BP793301.1,INSD:EL140643.1, INSD:BP600516.1,INSD:AV787091.1,INSD:BP609821.1, INSD:DR233317.1,INSD:BP808771.1,INSD:DR233310.1, INSD:AV800111.1,INSD:BP614366.1,INSD:BP779661.1, INSD:BP865345.1,INSD:BP859533.1,INSD:BP811612.1, INSD:AV808270.1,INSD:AA395575.1,INSD:BP668682.1, INSD:DR233319.1,INSD:DR233316.1,INSD:BP788869.1, INSD:DR233312.1,INSD:BP610354.1,INSD:BP809728.1, INSD:BP597841.1,INSD:BP607777.1,INSD:BP587015.1, INSD:EL229576.1,INSD:EH920419.1,INSD:BP835867.1, INSD:BP613779.1,INSD:DR233309.1,INSD:DR233322.1, INSD:BP616747.1,INSD:DR233321.1,INSD:ES092224.1, INSD:AV794944.1,INSD:BP823387.1,INSD:BP621713.1, INSD:BP616933.1,INSD:BP780104.1,INSD:BP829441.1, INSD:BP814214.1,INSD:BP600531.1,INSD:DR233313.1, INSD:BP857940.1,INSD:BP616708.1,INSD:BP602592.1, INSD:BP633644.1,INSD:ES020504.1,INSD:EL102993.1, INSD:BP667954.1,INSD:ES143510.1,INSD:EL196569.1, INSD:EL283074.1,INSD:AA394456.1,INSD:BP645431.1, INSD:BP599376.1,INSD:ES176735.1,INSD:AV808305.1, INSD:ES048549.1,INSD:BP617167.1,INSD:EH848835.1, INSD:EL164814.1,INSD:AV535217.1,INSD:BP668947.1, INSD:BP605432.1,INSD:EL070321.1,INSD:BP596785.1, INSD:H77217.1,INSD:EL035071.1,INSD:EL314243.1, INSD:EL278145.1,INSD:BP615916.1,INSD:AA597968.1, INSD:EH849099.1,INSD:EL251982.1,INSD:ES055204.1, INSD:EH941430.1,INSD:BP659271.1,INSD:AV799325.1, INSD:EH926445.1,INSD:AV824093.1,INSD:EH856441.1, INSD:BP820233.1,INSD:ES170078.1,INSD:EH855329.1, INSD:BP615812.1,INSD:BP854313.1,INSD:BP833279.1, INSD:BP810386.1,INSD:BP838201.1,INSD:BP643697.1, INSD:EL057193.1,INSD:BP594997.1,INSD:AA650785.1, INSD:AA605563.1,INSD:AV534736.1,INSD:EH836581.1, INSD:DR233318.1,INSD:CB259971.1,INSD:EL115337.1, INSD:DR370614.1,INSD:BP779711.1,INSD:EL083748.1, INSD:CB257798.1,INSD:BP620077.1,INSD:BP579005.1, INSD:BP606887.1,INSD:ES188134.1,INSD:ES141774.1, INSD:BP642121.1,INSD:AA040984.1,INSD:BP645879.1, INSD:AV800006.1,INSD:EH963628.1,INSD:BP605787.1, INSD:AV793706.1,INSD:AV783208.1,INSD:AV819488.1, INSD:BP615168.1,INSD:BP577606.1,INSD:BP617890.1, INSD:AV814731.1,INSD:EL208573.1,INSD:AV540693.1, INSD:BP858249.1,INSD:DR233311.1,INSD:DR233320.1, INSD:BP831137.1,INSD:EL064658.1,INSD:ES099315.1, INSD:BP806995.1,INSD:EL117891.1,INSD:BP839121.1, INSD:BP816220.1,INSD:DR233315.1" /inference="Similar to RNA sequence, mRNA:INSD:AK222131.1,INSD:AY125536.1,INSD:U72505.1, INSD:AY094441.1,INSD:AY087793.1,INSD:AB017643.1" /note="acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: fatty acid beta-oxidation, short-chain fatty acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 36828 Blast hits to 36765 proteins in 1995 species: Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi - 822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301 (source: NCBI BLink)." /db_xref="TAIR:AT3G51840" /db_xref="Araport:AT3G51840" intron_pos 10:1 (1/12) intron_pos 45:1 (2/12) intron_pos 81:0 (3/12) intron_pos 107:0 (4/12) intron_pos 148:1 (5/12) intron_pos 173:0 (6/12) intron_pos 193:0 (7/12) intron_pos 229:2 (8/12) intron_pos 283:0 (9/12) intron_pos 308:2 (10/12) intron_pos 366:0 (11/12) intron_pos 397:0 (12/12) BEGIN 1 MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ 61 AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV AGGSIKGYGC PGLSITANAI 121 ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG 181 SDASGLGTTA TKVEGGWKIN GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK 241 ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM 301 GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ 361 ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD LEPIYTYEGT YDINTLVTGR 421 EVTGIASFKP ATRSRL //