LOCUS       AEC10875.1              1015 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana zinc finger (CCCH type) helicase
            family protein protein.
ACCESSION   CP002685-7496
PROTEIN_ID  AEC10875.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G47680"
                     /gene_synonym="F17A22.7"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BX835827.1,INSD:EH808920.1,INSD:BX839837.1,
                     INSD:BE524696.1,INSD:EH804444.1"
                     /note="zinc finger (CCCH type) helicase family protein;
                     FUNCTIONS IN: helicase activity, zinc ion binding, nucleic
                     acid binding, ATP binding, ATP-dependent helicase
                     activity; INVOLVED IN: nucleobase, nucleoside, nucleotide
                     and nucleic acid metabolic process; LOCATED IN:
                     chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
                     DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
                     finger, CCCH-type (InterPro:IPR000571), DNA/RNA helicase,
                     DEAD/DEAH box type, N-terminal (InterPro:IPR011545),
                     DEAD-like helicase, N-terminal (InterPro:IPR014001),
                     DNA/RNA helicase, C-terminal (InterPro:IPR001650),
                     Helicase, superfamily 1/2, ATP-binding domain
                     (InterPro:IPR014021); BEST Arabidopsis thaliana protein
                     match is: DEA(D/H)-box RNA helicase family protein
                     (TAIR:AT2G01130.1); Has 9601 Blast hits to 8936 proteins
                     in 1526 species: Archae - 0; Bacteria - 3317; Metazoa -
                     2456; Fungi - 1337; Plants - 806; Viruses - 205; Other
                     Eukaryotes - 1480 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G47680"
                     /db_xref="TAIR:AT2G47680"
     intron_pos      54:1 (1/13)
     intron_pos      113:2 (2/13)
     intron_pos      171:2 (3/13)
     intron_pos      221:0 (4/13)
     intron_pos      324:0 (5/13)
     intron_pos      373:0 (6/13)
     intron_pos      433:1 (7/13)
     intron_pos      526:0 (8/13)
     intron_pos      565:0 (9/13)
     intron_pos      613:1 (10/13)
     intron_pos      703:0 (11/13)
     intron_pos      768:0 (12/13)
     intron_pos      946:0 (13/13)
BEGIN
        1 MAVSSPTSSS SSSESLPLPS SNFASLPIMA MKRRIIDKIL ENRVTLIVGE PGCGKSSQVP
       61 QFLLEANMAP ILCTQPRRFA VVAVAKMVAK SRNSDLGGEI GYHIGHSKIL TEGSKILFKT
      121 AGVLLDEMLD KGLNALKYKV IILDEVHERS VESDLVLVCV KQFLMKNNDL RVVLMSATAD
      181 ITRYRDYFKE LGRGERVEVV AIPSPDQRTI FQRRVLYLEQ VAGLLGVSSD LSAYCPGPSP
      241 SSADTEIKPE LQNLIHDLIL YIHEKEPDIE KSILVFLPTY YSLEQQYHQL EPFFASFEVH
      301 ILHRSIDTEQ ALAAMKICRS RRKVILATNI AESSVTIPKV AYVIDSCRSL QVFWDPSRKR
      361 DAVQLVWVSR SQAEQRRGRT GRTCDGEVYR LVPSAFFNKL EEHEPPSILK LSLRQQVLHI
      421 CCTESRAIND ANALLAKAMD PPDPDVVDDA LRMLLSIQAL RKSPRGRYEP TFYGRLLASF
      481 PLSFDASILV VKFGEMGMLR QGILLGVLMD TLPLPIHHPF GDDSLFLEYV DHYFGGSKTI
      541 SGGRREMVLM ANFCAFQFWQ RVFKDKHRLE NLKQLLSKEK DKDLKLMFPE IEKEWCDFHN
      601 IAQSSFYHVS ELYEDTLSSF HRFRPQFISS SDSQPTYYNP YEFDHTCYIE CQPSEDKYLH
      661 SEDVDNNQPP PEVRKCVSVP FVPPNAFQAN AIAENMASII KEIRTQCTPS ESDNGHGALE
      721 PEDYVEYGEA PVCVYFLNGY CNRGGQCTFT HTLQSTRPAC KFFASSQGCR NGESCLFSHA
      781 MRRRTTSYLP PPQCLPEEDG SSTSPLLDLF PTSSEGCILV FDDSDMHFTS SIANRYPSWR
      841 ILSTSSSSET LFCDSSLADT RIFWGLNHPY QTIISKAGRE NPIPWNEVKC VLWFLNPDSY
      901 ADTPEKQKTI LQNFFEHMAI RLLGDKLYKI RVVLTMNNVR FSLLQVEKLA RESFFFLGES
      961 FPHDSESFGA FQDTLTIQKP MLVSRPISYV FNLHPPSDIQ FGNYTSLLRK SLHNK
//