LOCUS AEC10266.1 561 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 3-beta hydroxysteroid dehydrogenase/
isomerase family protein protein.
ACCESSION CP002685-6668
PROTEIN_ID AEC10266.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G43420"
/gene_synonym="T1O24.16"
/inference="Similar to RNA sequence,
EST:INSD:DR366233.1,INSD:AV813487.1,INSD:AU238769.1,
INSD:AI996340.1,INSD:BP804906.1,INSD:BP581617.1,
INSD:EG439639.1,INSD:ES179685.1,INSD:BP602032.1,
INSD:DR366237.1,INSD:EL207376.1,INSD:DR366229.1,
INSD:DR366230.1,INSD:BP786318.1,INSD:ES029456.1,
INSD:BP603968.1,INSD:DR366235.1,INSD:DR366231.1,
INSD:DR366227.1,INSD:ES004966.1,INSD:EL015581.1,
INSD:EL116911.1,INSD:ES049908.1,INSD:AV823427.1,
INSD:EL181916.1,INSD:AV784387.1,INSD:DR366234.1,
INSD:EL286517.1,INSD:BP802360.1,INSD:DR383839.1,
INSD:AV797534.1,INSD:BP565651.1,INSD:BP784061.1,
INSD:BP588446.1,INSD:EL301580.1,INSD:DR366228.1,
INSD:BP575946.1,INSD:EG522845.1,INSD:AV537165.1,
INSD:EG439641.1,INSD:AU230007.1,INSD:ES063817.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819130.1,INSD:BX818936.1,INSD:AY045841.1,
INSD:AK117930.1"
/note="3-beta hydroxysteroid dehydrogenase/isomerase
family protein; FUNCTIONS IN: binding,
3-beta-hydroxy-delta5-steroid dehydrogenase activity,
catalytic activity; INVOLVED IN: steroid biosynthetic
process, metabolic process; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388), 3-beta hydroxysteroid
dehydrogenase/isomerase (InterPro:IPR002225),
NAD(P)-binding domain (InterPro:IPR016040); BEST
Arabidopsis thaliana protein match is:
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
(TAIR:AT2G26260.1); Has 10307 Blast hits to 10296 proteins
in 2122 species: Archae - 301; Bacteria - 6803; Metazoa -
545; Fungi - 280; Plants - 752; Viruses - 81; Other
Eukaryotes - 1545 (source: NCBI BLink)."
/db_xref="Araport:AT2G43420"
/db_xref="TAIR:AT2G43420"
intron_pos 83:1 (1/11)
intron_pos 113:1 (2/11)
intron_pos 158:0 (3/11)
intron_pos 215:0 (4/11)
intron_pos 254:0 (5/11)
intron_pos 280:2 (6/11)
intron_pos 345:0 (7/11)
intron_pos 379:1 (8/11)
intron_pos 437:2 (9/11)
intron_pos 490:0 (10/11)
intron_pos 512:1 (11/11)
BEGIN
1 MDEDSVHGDS HLKTCVVLGG RGFIGRSLVS RLLRLGNWTV RVADSGHTLH LDESDSLLED
61 ALSSGRASYH CVDVRDKPQI VKVTEGSYVV FYMGATDLRS HDYFDCYKVI VQGTRNVISA
121 CRESGVRKLI YNSTADVVFD GSQPIRDGDE SLRRPLKFQS MLTDFKAQAE ALIKLANNRD
181 GLLTCALRSS IVFGPGDTEF VPFLVNLAKS GYAKFILGSG ENISDFTYSE NVSHAHICAV
241 KALDSQMEFV AGKEFFITNL KPVRFWDFVS HIVEGLGYPR PSIKLPVRLV LYVFSLLKWT
301 HEKEGLGSNY DTAHQYALLA SSTRTFNCNA AKKHLGYTPV VTLEDGIAST LQWFSRDLEK
361 SDDTIIQSTA DQLLGCGKVA DILLWRNEKK TFVSFLVLNL FYYWFFFSGN TFTSSAAQLL
421 FIFAVALYGV SFVPSKIFGF QVNKIPPWRF EISESAVRDL SSDIVVVWNQ GVRSFKSLSS
481 GGDWIKFFKI AGSLYLLKLI VSRSLAAFLF TVMSFSFTGF FIYEQYELEL YHLARIFVEC
541 LTFIKRMVIP VSDASSKPMF M
//