LOCUS AEC09341.1 725 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PHE ammonia lyase 1 protein.
ACCESSION CP002685-5371
PROTEIN_ID AEC09341.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="PAL1"
/locus_tag="AT2G37040"
/gene_synonym="ATPAL1"
/gene_synonym="CI0004"
/gene_synonym="PHE ammonia lyase 1"
/gene_synonym="T1J8.22"
/gene_synonym="T1J8_22"
/inference="Similar to RNA sequence,
EST:INSD:EL266486.1,INSD:EH985932.1,INSD:EH948452.1,
INSD:AV799437.1,INSD:AV796746.1,INSD:BP621312.1,
INSD:BP814512.1,INSD:BP608663.1,INSD:EL095840.1,
INSD:AI996802.1,INSD:EG528897.1,INSD:BP606244.1,
INSD:AV544384.1,INSD:CF651945.1,INSD:BP647226.1,
INSD:EH957257.1,INSD:DR314945.1,INSD:BP656750.1,
INSD:AV822593.1,INSD:EL332883.1,INSD:DR314944.1,
INSD:AV813866.1,INSD:EH944393.1,INSD:AV811058.1,
INSD:EH835038.1,INSD:BP604246.1,INSD:EL084408.1,
INSD:EL223050.1,INSD:BP573114.1,INSD:EL270050.1,
INSD:EH959286.1,INSD:EL213681.1,INSD:EL272758.1,
INSD:EL060122.1,INSD:AV558154.1,INSD:EH876595.1,
INSD:EL027769.1,INSD:DR371806.1,INSD:EH905611.1,
INSD:EL331128.1,INSD:EL079169.1,INSD:EL238254.1,
INSD:EG528896.1,INSD:EL218009.1,INSD:EL012742.1,
INSD:EH852878.1,INSD:EL199204.1,INSD:EL007920.1,
INSD:EH974907.1,INSD:AV547233.1,INSD:EL266373.1,
INSD:EH921248.1,INSD:EH975110.1,INSD:EH867137.1,
INSD:EL002668.1,INSD:DR314942.1,INSD:EH902579.1,
INSD:EH965008.1,INSD:AV800034.1,INSD:EH912705.1,
INSD:EH798837.1,INSD:BP649958.1,INSD:BP838076.1,
INSD:BP868667.1,INSD:EH965521.1,INSD:EL249142.1,
INSD:BP811896.1,INSD:BP809938.1,INSD:EH818733.1,
INSD:EL029162.1,INSD:BP804162.1,INSD:EH795856.1,
INSD:EL006253.1,INSD:EL123716.1,INSD:EL020619.1,
INSD:DR314940.1,INSD:EL080966.1,INSD:EL000498.1,
INSD:BP833299.1,INSD:EL101393.1,INSD:BP598055.1,
INSD:EH988513.1,INSD:AV807876.1,INSD:EH898653.1,
INSD:AV803304.1,INSD:EH803039.1,INSD:AV547003.1,
INSD:EH901902.1,INSD:EH940790.1,INSD:EH941699.1,
INSD:EL275084.1,INSD:EH895307.1,INSD:EL297342.1,
INSD:AV548162.1,INSD:EL294927.1,INSD:EG523708.1,
INSD:AV782023.1,INSD:AV827883.1,INSD:EL140681.1,
INSD:EH845798.1,INSD:BP599452.1,INSD:EL012866.1,
INSD:EH944072.1,INSD:EL280276.1,INSD:AV831948.1,
INSD:BP780672.1,INSD:EL010101.1,INSD:EL207401.1,
INSD:BP634703.1,INSD:EH909918.1,INSD:DR314943.1,
INSD:EL107397.1,INSD:EL320984.1,INSD:EL151408.1,
INSD:AV548578.1,INSD:BP815305.2,INSD:AV799715.1,
INSD:EL091794.1,INSD:BP800462.2,INSD:BP839482.1,
INSD:EL162198.1,INSD:EL171451.1,INSD:EL141348.1,
INSD:BP815857.1,INSD:EL151391.1,INSD:DR314941.1,
INSD:EL323359.1,INSD:EL279217.1,INSD:EH969351.1,
INSD:EH843194.1,INSD:EL041103.1,INSD:EL280578.1,
INSD:AV547237.1,INSD:AV564792.1,INSD:AA713237.1,
INSD:EG528903.1,INSD:AA713341.1,INSD:EL046237.1,
INSD:BP853588.1,INSD:AV783398.1,INSD:BP570190.1,
INSD:EL163622.1,INSD:EH850834.1,INSD:AV548764.1,
INSD:DR355710.1,INSD:EH831321.1,INSD:AV820059.1,
INSD:EL092112.1,INSD:AV548688.1,INSD:AV814576.1,
INSD:EL028811.1,INSD:EH948908.1,INSD:EH876624.1,
INSD:BP822039.1,INSD:EL267301.1,INSD:EH905698.1,
INSD:AV830285.1,INSD:EL275710.1,INSD:EL341505.1,
INSD:EL119235.1,INSD:EG523707.1,INSD:AV547892.1,
INSD:EL226313.1,INSD:EG457524.1,INSD:EL331014.1,
INSD:AV525294.1,INSD:BP841077.1,INSD:DR314939.1,
INSD:BP841273.1,INSD:BP579565.1,INSD:EL146771.1,
INSD:EL102490.1,INSD:EL259796.1,INSD:EL014246.1,
INSD:EH961489.1,INSD:AV547875.1,INSD:BP650104.1,
INSD:EL185852.1,INSD:BP818890.1,INSD:EG528904.1,
INSD:BP832067.1,INSD:AV552864.1,INSD:BP631640.1,
INSD:EL049620.1,INSD:DR375484.1,INSD:BP612213.1,
INSD:AV806160.1,INSD:EL335556.1,INSD:BP807588.1,
INSD:EH910294.1,INSD:BP644367.1,INSD:AV797825.1,
INSD:AV812944.1,INSD:EH850614.1,INSD:EL115641.1,
INSD:BP619543.1,INSD:BP610182.1,INSD:EH952295.1,
INSD:EL127727.1,INSD:EL022764.1,INSD:EH971899.1,
INSD:BP794537.1,INSD:AA713101.1,INSD:EL253793.1,
INSD:EL260019.1,INSD:EL199303.1,INSD:EL267376.1,
INSD:EL124914.1,INSD:EL189288.1,INSD:ES056966.1,
INSD:BP585250.1,INSD:EL107067.1,INSD:AV796302.1,
INSD:BP568463.1,INSD:BP830637.2,INSD:BP860260.1,
INSD:EL214968.1,INSD:BP814014.1,INSD:BP577255.1,
INSD:ES029489.1,INSD:BP609384.1,INSD:EH992258.1,
INSD:BP576615.1,INSD:EL211640.1,INSD:AV786039.1,
INSD:AV829394.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821358.1,INSD:AK221928.1,INSD:AY303128.1,
INSD:AY045919.1,INSD:AK221124.1,INSD:AY079363.1,
INSD:BT003330.1"
/note="PHE ammonia lyase 1 (PAL1); FUNCTIONS IN:
phenylalanine ammonia-lyase activity; INVOLVED IN: in 10
processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase
(InterPro:IPR001106), Phenylalanine/histidine
ammonia-lyases, active site (InterPro:IPR022313),
L-Aspartase-like (InterPro:IPR008948), Phenylalanine
ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis
thaliana protein match is: phenylalanine ammonia-lyase 2
(TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins
in 1414 species: Archae - 40; Bacteria - 2973; Metazoa -
79; Fungi - 127; Plants - 1176; Viruses - 0; Other
Eukaryotes - 493 (source: NCBI BLink)."
/db_xref="Araport:AT2G37040"
/db_xref="TAIR:AT2G37040"
intron_pos 143:2 (1/1)
BEGIN
1 MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF
61 RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN ASSDWVMESM NKGTDSYGVT
121 TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF
181 SGIRFEILEA ITSFLNNNIT PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA
241 LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301 EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY
361 ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR NKAIHGGNFQ GTPIGVSMDN
421 TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY
481 LANPVTSHVQ SAEQHNQDVN SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN
541 LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601 KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR
661 IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA ICEGKIIDPM MECLNEWNGA
721 PIPIC
//