LOCUS AEC09341.1 725 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana PHE ammonia lyase 1 protein. ACCESSION CP002685-5371 PROTEIN_ID AEC09341.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="PAL1" /locus_tag="AT2G37040" /gene_synonym="ATPAL1" /gene_synonym="CI0004" /gene_synonym="PHE ammonia lyase 1" /gene_synonym="T1J8.22" /gene_synonym="T1J8_22" /inference="Similar to RNA sequence, EST:INSD:EL266486.1,INSD:EH985932.1,INSD:EH948452.1, INSD:AV799437.1,INSD:AV796746.1,INSD:BP621312.1, INSD:BP814512.1,INSD:BP608663.1,INSD:EL095840.1, INSD:AI996802.1,INSD:EG528897.1,INSD:BP606244.1, INSD:AV544384.1,INSD:CF651945.1,INSD:BP647226.1, INSD:EH957257.1,INSD:DR314945.1,INSD:BP656750.1, INSD:AV822593.1,INSD:EL332883.1,INSD:DR314944.1, INSD:AV813866.1,INSD:EH944393.1,INSD:AV811058.1, INSD:EH835038.1,INSD:BP604246.1,INSD:EL084408.1, INSD:EL223050.1,INSD:BP573114.1,INSD:EL270050.1, INSD:EH959286.1,INSD:EL213681.1,INSD:EL272758.1, INSD:EL060122.1,INSD:AV558154.1,INSD:EH876595.1, INSD:EL027769.1,INSD:DR371806.1,INSD:EH905611.1, INSD:EL331128.1,INSD:EL079169.1,INSD:EL238254.1, INSD:EG528896.1,INSD:EL218009.1,INSD:EL012742.1, INSD:EH852878.1,INSD:EL199204.1,INSD:EL007920.1, INSD:EH974907.1,INSD:AV547233.1,INSD:EL266373.1, INSD:EH921248.1,INSD:EH975110.1,INSD:EH867137.1, INSD:EL002668.1,INSD:DR314942.1,INSD:EH902579.1, INSD:EH965008.1,INSD:AV800034.1,INSD:EH912705.1, INSD:EH798837.1,INSD:BP649958.1,INSD:BP838076.1, INSD:BP868667.1,INSD:EH965521.1,INSD:EL249142.1, INSD:BP811896.1,INSD:BP809938.1,INSD:EH818733.1, INSD:EL029162.1,INSD:BP804162.1,INSD:EH795856.1, INSD:EL006253.1,INSD:EL123716.1,INSD:EL020619.1, INSD:DR314940.1,INSD:EL080966.1,INSD:EL000498.1, INSD:BP833299.1,INSD:EL101393.1,INSD:BP598055.1, INSD:EH988513.1,INSD:AV807876.1,INSD:EH898653.1, INSD:AV803304.1,INSD:EH803039.1,INSD:AV547003.1, INSD:EH901902.1,INSD:EH940790.1,INSD:EH941699.1, INSD:EL275084.1,INSD:EH895307.1,INSD:EL297342.1, INSD:AV548162.1,INSD:EL294927.1,INSD:EG523708.1, INSD:AV782023.1,INSD:AV827883.1,INSD:EL140681.1, INSD:EH845798.1,INSD:BP599452.1,INSD:EL012866.1, INSD:EH944072.1,INSD:EL280276.1,INSD:AV831948.1, INSD:BP780672.1,INSD:EL010101.1,INSD:EL207401.1, INSD:BP634703.1,INSD:EH909918.1,INSD:DR314943.1, INSD:EL107397.1,INSD:EL320984.1,INSD:EL151408.1, INSD:AV548578.1,INSD:BP815305.2,INSD:AV799715.1, INSD:EL091794.1,INSD:BP800462.2,INSD:BP839482.1, INSD:EL162198.1,INSD:EL171451.1,INSD:EL141348.1, INSD:BP815857.1,INSD:EL151391.1,INSD:DR314941.1, INSD:EL323359.1,INSD:EL279217.1,INSD:EH969351.1, INSD:EH843194.1,INSD:EL041103.1,INSD:EL280578.1, INSD:AV547237.1,INSD:AV564792.1,INSD:AA713237.1, INSD:EG528903.1,INSD:AA713341.1,INSD:EL046237.1, INSD:BP853588.1,INSD:AV783398.1,INSD:BP570190.1, INSD:EL163622.1,INSD:EH850834.1,INSD:AV548764.1, INSD:DR355710.1,INSD:EH831321.1,INSD:AV820059.1, INSD:EL092112.1,INSD:AV548688.1,INSD:AV814576.1, INSD:EL028811.1,INSD:EH948908.1,INSD:EH876624.1, INSD:BP822039.1,INSD:EL267301.1,INSD:EH905698.1, INSD:AV830285.1,INSD:EL275710.1,INSD:EL341505.1, INSD:EL119235.1,INSD:EG523707.1,INSD:AV547892.1, INSD:EL226313.1,INSD:EG457524.1,INSD:EL331014.1, INSD:AV525294.1,INSD:BP841077.1,INSD:DR314939.1, INSD:BP841273.1,INSD:BP579565.1,INSD:EL146771.1, INSD:EL102490.1,INSD:EL259796.1,INSD:EL014246.1, INSD:EH961489.1,INSD:AV547875.1,INSD:BP650104.1, INSD:EL185852.1,INSD:BP818890.1,INSD:EG528904.1, INSD:BP832067.1,INSD:AV552864.1,INSD:BP631640.1, INSD:EL049620.1,INSD:DR375484.1,INSD:BP612213.1, INSD:AV806160.1,INSD:EL335556.1,INSD:BP807588.1, INSD:EH910294.1,INSD:BP644367.1,INSD:AV797825.1, INSD:AV812944.1,INSD:EH850614.1,INSD:EL115641.1, INSD:BP619543.1,INSD:BP610182.1,INSD:EH952295.1, INSD:EL127727.1,INSD:EL022764.1,INSD:EH971899.1, INSD:BP794537.1,INSD:AA713101.1,INSD:EL253793.1, INSD:EL260019.1,INSD:EL199303.1,INSD:EL267376.1, INSD:EL124914.1,INSD:EL189288.1,INSD:ES056966.1, INSD:BP585250.1,INSD:EL107067.1,INSD:AV796302.1, INSD:BP568463.1,INSD:BP830637.2,INSD:BP860260.1, INSD:EL214968.1,INSD:BP814014.1,INSD:BP577255.1, INSD:ES029489.1,INSD:BP609384.1,INSD:EH992258.1, INSD:BP576615.1,INSD:EL211640.1,INSD:AV786039.1, INSD:AV829394.1" /inference="similar to RNA sequence, mRNA:INSD:BX821358.1,INSD:AK221928.1,INSD:AY303128.1, INSD:AY045919.1,INSD:AK221124.1,INSD:AY079363.1, INSD:BT003330.1" /note="PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink)." /db_xref="Araport:AT2G37040" /db_xref="TAIR:AT2G37040" intron_pos 143:2 (1/1) BEGIN 1 MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF 61 RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN ASSDWVMESM NKGTDSYGVT 121 TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF 181 SGIRFEILEA ITSFLNNNIT PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA 241 LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA 301 EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY 361 ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR NKAIHGGNFQ GTPIGVSMDN 421 TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY 481 LANPVTSHVQ SAEQHNQDVN SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN 541 LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ 601 KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR 661 IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA ICEGKIIDPM MECLNEWNGA 721 PIPIC //