LOCUS AEC07032.1 891 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 26S proteasome regulatory subunit
S2 1A protein.
ACCESSION CP002685-2234
PROTEIN_ID AEC07032.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RPN1A"
/locus_tag="AT2G20580"
/gene_synonym="26S proteasome regulatory subunit S2 1A"
/gene_synonym="26S PROTEASOME REGULATORY SUBUNIT S2 1A"
/gene_synonym="ATRPN1A"
/gene_synonym="F23N11.10"
/gene_synonym="F23N11_10"
/inference="Similar to RNA sequence,
EST:INSD:EL097945.1,INSD:EH903843.1,INSD:EL276326.1,
INSD:ES139956.1,INSD:EG498998.1,INSD:EL323301.1,
INSD:ES129674.1,INSD:AV830023.1,INSD:BP588112.1,
INSD:BP570426.1,INSD:BP823785.1,INSD:EL295174.1,
INSD:BP829590.1,INSD:EL260286.1,INSD:BP807652.1,
INSD:ES077589.1,INSD:DR346435.1,INSD:AV552105.1,
INSD:EH808583.1,INSD:AV527107.1,INSD:ES110553.1,
INSD:EL224723.1,INSD:EH965070.1,INSD:W43677.1,
INSD:BP598757.1,INSD:BP599464.1,INSD:EH805808.1,
INSD:BP566488.1,INSD:DR346434.1,INSD:CB260103.1,
INSD:EL175436.1,INSD:EH887524.1,INSD:ES115032.1,
INSD:EH886217.1,INSD:BP643428.1,INSD:BP865106.1,
INSD:EL110073.1,INSD:AV798799.1,INSD:EH801081.1,
INSD:ES104270.1,INSD:ES118778.1,INSD:AV566456.1,
INSD:ES116154.1,INSD:BP636753.1,INSD:BP613532.1,
INSD:EH953617.1,INSD:ES053696.1,INSD:ES083556.1,
INSD:AV548721.1,INSD:AV524234.1,INSD:EG500849.1,
INSD:ES041518.1,INSD:AW004247.1,INSD:BP604827.1,
INSD:ES016693.1,INSD:AV540258.1,INSD:ES158475.1,
INSD:EL168884.1,INSD:ES115462.1,INSD:AV554020.1,
INSD:AV805858.1,INSD:BP652800.1,INSD:EH982351.1,
INSD:ES132201.1,INSD:BP835356.1,INSD:BP823466.1,
INSD:EH974287.1,INSD:EH908163.1,INSD:BP814674.1,
INSD:EL106716.1,INSD:EL985165.1,INSD:EL207739.1,
INSD:EL267468.1,INSD:BP634250.1,INSD:AV546394.1,
INSD:BP640678.1,INSD:EH956498.1,INSD:EG500783.1,
INSD:EG508930.1,INSD:BP817898.1,INSD:EL304371.1,
INSD:AV565881.1,INSD:EL011194.1,INSD:ES145754.1,
INSD:BP604599.1,INSD:ES107839.1,INSD:EH975504.1,
INSD:BP661370.1,INSD:ES204782.1,INSD:ES133838.1,
INSD:EL999355.1,INSD:DR346437.1,INSD:BP826425.1,
INSD:EL117671.1,INSD:EL040589.1,INSD:ES149429.1,
INSD:BP644779.1,INSD:BP812219.1,INSD:AV548473.1,
INSD:ES130074.1,INSD:CD535011.1,INSD:EH963361.1,
INSD:BP579551.1,INSD:ES010848.1,INSD:AV547600.1,
INSD:DR346436.1,INSD:AV550332.1,INSD:ES184572.1,
INSD:ES059568.1,INSD:EL229227.1,INSD:EL036363.1,
INSD:DR376815.1,INSD:AV530098.1,INSD:BP634251.1,
INSD:BP583018.1,INSD:BP611720.1,INSD:BP799870.1,
INSD:EL103955.1,INSD:BP832977.1,INSD:EG500785.1,
INSD:ES127675.1,INSD:EL188371.1,INSD:ES190252.1,
INSD:ES179196.1,INSD:BP826784.1,INSD:ES059211.1,
INSD:BE527819.1,INSD:AV538176.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF360216.1,INSD:AY040061.1,INSD:AK220903.1,
INSD:AY230828.1"
/note="26S proteasome regulatory subunit S2 1A (RPN1A);
FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED
IN: regulation of cell cycle, protein catabolic process,
ubiquitin-dependent protein catabolic process; LOCATED IN:
proteasome regulatory particle, base subcomplex,
proteasome complex, nucleus, plasma membrane; EXPRESSED
IN: 28 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: 26S proteasome
regulatory complex, non-ATPase subcomplex, Rpn1 subunit
(InterPro:IPR016643), Armadillo-type fold
(InterPro:IPR016024), Proteasome/cyclosome, regulatory
subunit (InterPro:IPR002015); BEST Arabidopsis thaliana
protein match is: 26S proteasome regulatory subunit S2 1B
(TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in
295 species: Archae - 0; Bacteria - 4; Metazoa - 376;
Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes -
187 (source: NCBI BLink)."
/db_xref="Araport:AT2G20580"
/db_xref="TAIR:AT2G20580"
intron_pos 40:0 (1/22)
intron_pos 73:2 (2/22)
intron_pos 114:0 (3/22)
intron_pos 134:0 (4/22)
intron_pos 171:0 (5/22)
intron_pos 193:0 (6/22)
intron_pos 233:2 (7/22)
intron_pos 272:0 (8/22)
intron_pos 297:0 (9/22)
intron_pos 350:0 (10/22)
intron_pos 386:0 (11/22)
intron_pos 420:0 (12/22)
intron_pos 467:0 (13/22)
intron_pos 502:0 (14/22)
intron_pos 576:0 (15/22)
intron_pos 614:0 (16/22)
intron_pos 686:0 (17/22)
intron_pos 706:0 (18/22)
intron_pos 744:0 (19/22)
intron_pos 772:2 (20/22)
intron_pos 809:0 (21/22)
intron_pos 868:2 (22/22)
BEGIN
1 MAPTQDPNSV GGGAKKDEAT LKVPSKDPKK KDEKKDEDLS EEDLELKQNL ELYVERVQDP
61 NPELQKAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL KAFHETMADS DLKKYLSDIL
121 SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM
181 ELVQQIVAFH MKHNAETEAV DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD
241 MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301 ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG
361 ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS GNWLFKNKEH GKTSAAASLG
421 MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS
481 SVRIGAIMGL GISYAGSQND QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA
541 QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601 LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM
661 LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD SEVAMSAIIS LGLIGAGTNN
721 ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT
781 LLHACLDMKP IILGKYHYVL YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR
841 PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
//