LOCUS AEC07032.1 891 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana 26S proteasome regulatory subunit S2 1A protein. ACCESSION CP002685-2234 PROTEIN_ID AEC07032.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="RPN1A" /locus_tag="AT2G20580" /gene_synonym="26S proteasome regulatory subunit S2 1A" /gene_synonym="26S PROTEASOME REGULATORY SUBUNIT S2 1A" /gene_synonym="ATRPN1A" /gene_synonym="F23N11.10" /gene_synonym="F23N11_10" /inference="Similar to RNA sequence, EST:INSD:EL097945.1,INSD:EH903843.1,INSD:EL276326.1, INSD:ES139956.1,INSD:EG498998.1,INSD:EL323301.1, INSD:ES129674.1,INSD:AV830023.1,INSD:BP588112.1, INSD:BP570426.1,INSD:BP823785.1,INSD:EL295174.1, INSD:BP829590.1,INSD:EL260286.1,INSD:BP807652.1, INSD:ES077589.1,INSD:DR346435.1,INSD:AV552105.1, INSD:EH808583.1,INSD:AV527107.1,INSD:ES110553.1, INSD:EL224723.1,INSD:EH965070.1,INSD:W43677.1, INSD:BP598757.1,INSD:BP599464.1,INSD:EH805808.1, INSD:BP566488.1,INSD:DR346434.1,INSD:CB260103.1, INSD:EL175436.1,INSD:EH887524.1,INSD:ES115032.1, INSD:EH886217.1,INSD:BP643428.1,INSD:BP865106.1, INSD:EL110073.1,INSD:AV798799.1,INSD:EH801081.1, INSD:ES104270.1,INSD:ES118778.1,INSD:AV566456.1, INSD:ES116154.1,INSD:BP636753.1,INSD:BP613532.1, INSD:EH953617.1,INSD:ES053696.1,INSD:ES083556.1, INSD:AV548721.1,INSD:AV524234.1,INSD:EG500849.1, INSD:ES041518.1,INSD:AW004247.1,INSD:BP604827.1, INSD:ES016693.1,INSD:AV540258.1,INSD:ES158475.1, INSD:EL168884.1,INSD:ES115462.1,INSD:AV554020.1, INSD:AV805858.1,INSD:BP652800.1,INSD:EH982351.1, INSD:ES132201.1,INSD:BP835356.1,INSD:BP823466.1, INSD:EH974287.1,INSD:EH908163.1,INSD:BP814674.1, INSD:EL106716.1,INSD:EL985165.1,INSD:EL207739.1, INSD:EL267468.1,INSD:BP634250.1,INSD:AV546394.1, INSD:BP640678.1,INSD:EH956498.1,INSD:EG500783.1, INSD:EG508930.1,INSD:BP817898.1,INSD:EL304371.1, INSD:AV565881.1,INSD:EL011194.1,INSD:ES145754.1, INSD:BP604599.1,INSD:ES107839.1,INSD:EH975504.1, INSD:BP661370.1,INSD:ES204782.1,INSD:ES133838.1, INSD:EL999355.1,INSD:DR346437.1,INSD:BP826425.1, INSD:EL117671.1,INSD:EL040589.1,INSD:ES149429.1, INSD:BP644779.1,INSD:BP812219.1,INSD:AV548473.1, INSD:ES130074.1,INSD:CD535011.1,INSD:EH963361.1, INSD:BP579551.1,INSD:ES010848.1,INSD:AV547600.1, INSD:DR346436.1,INSD:AV550332.1,INSD:ES184572.1, INSD:ES059568.1,INSD:EL229227.1,INSD:EL036363.1, INSD:DR376815.1,INSD:AV530098.1,INSD:BP634251.1, INSD:BP583018.1,INSD:BP611720.1,INSD:BP799870.1, INSD:EL103955.1,INSD:BP832977.1,INSD:EG500785.1, INSD:ES127675.1,INSD:EL188371.1,INSD:ES190252.1, INSD:ES179196.1,INSD:BP826784.1,INSD:ES059211.1, INSD:BE527819.1,INSD:AV538176.1" /inference="similar to RNA sequence, mRNA:INSD:AF360216.1,INSD:AY040061.1,INSD:AK220903.1, INSD:AY230828.1" /note="26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink)." /db_xref="Araport:AT2G20580" /db_xref="TAIR:AT2G20580" intron_pos 40:0 (1/22) intron_pos 73:2 (2/22) intron_pos 114:0 (3/22) intron_pos 134:0 (4/22) intron_pos 171:0 (5/22) intron_pos 193:0 (6/22) intron_pos 233:2 (7/22) intron_pos 272:0 (8/22) intron_pos 297:0 (9/22) intron_pos 350:0 (10/22) intron_pos 386:0 (11/22) intron_pos 420:0 (12/22) intron_pos 467:0 (13/22) intron_pos 502:0 (14/22) intron_pos 576:0 (15/22) intron_pos 614:0 (16/22) intron_pos 686:0 (17/22) intron_pos 706:0 (18/22) intron_pos 744:0 (19/22) intron_pos 772:2 (20/22) intron_pos 809:0 (21/22) intron_pos 868:2 (22/22) BEGIN 1 MAPTQDPNSV GGGAKKDEAT LKVPSKDPKK KDEKKDEDLS EEDLELKQNL ELYVERVQDP 61 NPELQKAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL KAFHETMADS DLKKYLSDIL 121 SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM 181 ELVQQIVAFH MKHNAETEAV DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD 241 MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF 301 ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG 361 ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS GNWLFKNKEH GKTSAAASLG 421 MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS 481 SVRIGAIMGL GISYAGSQND QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA 541 QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL 601 LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM 661 LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD SEVAMSAIIS LGLIGAGTNN 721 ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT 781 LLHACLDMKP IILGKYHYVL YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR 841 PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E //