LOCUS AEC06489.1 519 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana thymidylate synthase 1 protein.
ACCESSION CP002685-1490
PROTEIN_ID AEC06489.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="THY-1"
/locus_tag="AT2G16370"
/gene_synonym="DIHYDROFOLATE REDUCTASE-THYMIDYLATE
SYNTHASE"
/gene_synonym="F16F14.13"
/gene_synonym="F16F14_13"
/gene_synonym="thymidylate synthase 1"
/inference="Similar to RNA sequence,
EST:INSD:BP633601.1,INSD:BX840101.1,INSD:ES175805.1,
INSD:BP665940.1,INSD:EH878023.1,INSD:AV785857.1,
INSD:BP846629.1,INSD:EL229296.1,INSD:AV824362.1,
INSD:BP573673.1,INSD:BP626187.1,INSD:EL066321.1,
INSD:ES129490.1,INSD:ES071234.1,INSD:BX836058.1,
INSD:EL339429.1,INSD:BP580480.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY114032.1,INSD:AY063968.1"
/note="thymidylate synthase 1 (THY-1); CONTAINS InterPro
DOMAIN/s: Thymidylate synthase, active site
(InterPro:IPR020940), Dihydrofolate reductase domain
(InterPro:IPR001796), Dihydrofolate reductase conserved
site (InterPro:IPR017925), Bifunctional dihydrofolate
reductase/thymidylate synthase (InterPro:IPR012262),
Thymidylate synthase (InterPro:IPR000398); BEST
Arabidopsis thaliana protein match is: thymidylate
synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to
13433 proteins in 2607 species: Archae - 76; Bacteria -
8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses -
253; Other Eukaryotes - 3408 (source: NCBI BLink)."
/db_xref="Araport:AT2G16370"
/db_xref="TAIR:AT2G16370"
intron_pos 141:2 (1/8)
intron_pos 269:0 (2/8)
intron_pos 284:0 (3/8)
intron_pos 306:0 (4/8)
intron_pos 326:2 (5/8)
intron_pos 351:2 (6/8)
intron_pos 407:0 (7/8)
intron_pos 484:0 (8/8)
BEGIN
1 MATTTLNDSV TTTLASEPQR TYQVVVAATK EMGIGKDGKL PWNLPTDLKF FKDITLTTSD
61 SSKKNAVVMG RKTWESIPIK YRPLSGRLNV VLTRSGGFDI ANTENVVTCS SVDSALDLLA
121 APPYCLSIER VFVIGGGDIL REALNRPSCD AIHLTEIDTS VDCDTFIPAI DTSVYQPWSS
181 SFPVTENGLR FCFTTFVRVK SSADESSDES NGSQSLQFDG KKFLFLPKMV FDQHEEFLYL
241 NMVEDIISNG NVKNDRTGTG TLSKFGCQMK FNLRRSFPLL TTKRVFWRGV VEELLWFISG
301 STNAKVLQEK GIHIWDGNAS REYLDGIGLT EREEGDLGPV YGFQWRHFGA KYTDMHADYT
361 GQGFDQLVDV IDKIKNNPDD RRIIMSAWNP SDLKLMALPP CHMFAQFYVA EGELSCQMYQ
421 RSADMGLGVP FNIASYSLLT CMLAHVCDLV PGDFIHVLGD AHVYKTHVRP LQEQLLNLPK
481 PFPVMKINPE KKQIDSFVAS DFDLTGYDPH KKIEMKMAV
//