LOCUS BC026989 2168 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens oligodendrocyte transcription factor 1, mRNA (cDNA clone MGC:30174 IMAGE:4944525), complete cds. ACCESSION BC026989 VERSION BC026989.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2168) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2168) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: i Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 59709757. FEATURES Location/Qualifiers source 1..2168 /db_xref="H-InvDB:HIT000040240" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:30174 IMAGE:4944525" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2168 /gene="OLIG1" /gene_synonym="BHLHB6" /db_xref="GeneID:116448" /db_xref="HGNC:HGNC:16983" /db_xref="MIM:606385" CDS 29..796 /gene="OLIG1" /gene_synonym="BHLHB6" /codon_start=1 /product="oligodendrocyte transcription factor 1" /protein_id="AAH26989.1" /db_xref="GeneID:116448" /db_xref="HGNC:HGNC:16983" /db_xref="MIM:606385" /translation="MLRPQRPGDLQLGASLYELVGYRQPPSSSSSSTSSTSSTSSSST TAPLLPKAAREKPEAPAEPPGPGPGSGAHPGGSARPDAKEEQQQQLRRKINSRERKRM QDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLLGSSLQELRRALG EGAGPAAPRLLLAGLPLLAAAPGSVLLAPGAVGPPDALRPAKYLSLALDEPPCGQFAL PGGGAGGPGLCTCAVCKFPHLVPASLGLAAVQAQFSK" BASE COUNT 369 a 718 c 661 g 420 t ORIGIN 1 ggcgcgcgtg aacgcggtcc ccgggaccat gctgcggcca cagcggcccg gagacttgca 61 gctcggggcc tccctctacg agctggtggg ctacaggcag ccgccctcct cctcctcctc 121 ctccacctcc tccacctcct ccacttcctc ctcctccacg acggcccccc tcctccccaa 181 ggctgcgcgc gagaagccgg aggcgccggc cgagcctcca ggccccgggc ccgggtcagg 241 cgcgcacccg ggcggcagcg cccggccgga cgccaaggag gagcagcagc agcagctgcg 301 gcgcaagatc aacagccgcg agcggaagcg catgcaggac ctgaacctgg ccatggacgc 361 cctgcgcgag gtcatcctgc cctactcagc ggcgcactgc cagggcgcgc ccggccgcaa 421 gctctccaag atagccacgc tgctgctcgc ccgcaactac atcctactgc tgggcagctc 481 gctgcaggag ctgcgccgcg cgctgggcga gggcgccggg cccgccgcgc cgcgcctgct 541 gctggccggg ctgcccctgc tcgccgccgc gcccggctcc gtgttgctgg cgcccggcgc 601 cgtaggaccc cccgacgcgc tgcgccccgc caagtacctg tcgctggcgc tggacgagcc 661 gccgtgcggc cagttcgctc tccccggcgg cggcgcaggc ggccccggcc tctgcacctg 721 cgccgtgtgc aagttcccgc acctggtccc ggccagcctg ggcctggccg ccgtgcaggc 781 gcaattctcc aagtgagggc gggcctgggc ctggggcgcg acctcggccc ggcctccctt 841 cgctcagctt ctccgcgccc ctgctccctg cgtctgggag agcgaggccg agcaaggaaa 901 gcatttcgaa ccttccagtc cagaggaagg gactgtcggg cacccccttc cccgccccca 961 cccctgggac gttaaagtga ccagagcgga tgttcgatgg cgcctcgggg cagtttgggg 1021 ttctgggtcg gttccagcgg ctttaggcag aaagtgctcg ctctcaccca gcacatctct 1081 ctccttgtcc ctggagttgc gcgcttcgcg gggccgatgt agaacttagg gcgccttgcc 1141 gtggttggcg cgccccgggt gcagcgagag gccatccccg agcgctatct ccccggagcg 1201 gagcacgccg gctcccagta ctaggggctg cgctcgagca gtggcggggg cggaggggtg 1261 gttcttttcc ttctcctccg ccagaggcca cgggcgccct tgttcccgcc ggccaggtcc 1321 tatcaaagga ggctgccgga actcaagagg cagaaaaaga ccagttaggc ggtgcagacg 1381 gtctgggacg tggcagacgg acggaccctc ggcggacagg tggtcggcgt cggggtgcgg 1441 tgggtagggg cgaggacaac gcagggtgcg ctgggttggg acgtgggtcc acttttgtag 1501 accagctgtt tggagagctg tatttaagac tcgcgtatcc agtgttttgt cgcagagagt 1561 tttcgctctt aaatcctggg ggtttcttag aaagcaactt agaactcgag attcaccttt 1621 cgtttccctt tccccaaaag tagcgtaacc aacatttaag cttgcttaaa aacgaaaacc 1681 aaccgccttg catccagtgt tcccgattta ctaaaatagg taaccaggcg tctcacagtc 1741 gccgtcctgt caagagcgct aatgaacgtt ctcattaaca cgcaggagta ccgggagccc 1801 tgaaccgccc gctgctcggc ggatcccagc tgcggtggcg acggcgggaa ggcgctttcc 1861 gctgttcctc agcgggccgg gcccttgacc agcgcggccc gcaggtcttc cttctcgccg 1921 tcttgcagtt gaagagctac atacgtagtc agtttcgatt tgttacagac gttaacaaat 1981 tcctttaccc aaggttatgc tatgaccttt ccgcagttta ctttgatttt ctatgtttaa 2041 ggttttggtt gttggtagta gccgaattta actggcactt tattttactt ctaaccttgt 2101 ttcctgacgg tgtacagaat caacaaaata aaacatttaa agtctgattt tttaaaaaaa 2161 aaaaaaaa //