LOCUS BC026989 2168 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens oligodendrocyte transcription factor 1, mRNA (cDNA
clone MGC:30174 IMAGE:4944525), complete cds.
ACCESSION BC026989
VERSION BC026989.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2168)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2168)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59709757.
FEATURES Location/Qualifiers
source 1..2168
/db_xref="H-InvDB:HIT000040240"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:30174 IMAGE:4944525"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2168
/gene="OLIG1"
/gene_synonym="BHLHB6"
/db_xref="GeneID:116448"
/db_xref="HGNC:HGNC:16983"
/db_xref="MIM:606385"
CDS 29..796
/gene="OLIG1"
/gene_synonym="BHLHB6"
/codon_start=1
/product="oligodendrocyte transcription factor 1"
/protein_id="AAH26989.1"
/db_xref="GeneID:116448"
/db_xref="HGNC:HGNC:16983"
/db_xref="MIM:606385"
/translation="MLRPQRPGDLQLGASLYELVGYRQPPSSSSSSTSSTSSTSSSST
TAPLLPKAAREKPEAPAEPPGPGPGSGAHPGGSARPDAKEEQQQQLRRKINSRERKRM
QDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLLGSSLQELRRALG
EGAGPAAPRLLLAGLPLLAAAPGSVLLAPGAVGPPDALRPAKYLSLALDEPPCGQFAL
PGGGAGGPGLCTCAVCKFPHLVPASLGLAAVQAQFSK"
BASE COUNT 369 a 718 c 661 g 420 t
ORIGIN
1 ggcgcgcgtg aacgcggtcc ccgggaccat gctgcggcca cagcggcccg gagacttgca
61 gctcggggcc tccctctacg agctggtggg ctacaggcag ccgccctcct cctcctcctc
121 ctccacctcc tccacctcct ccacttcctc ctcctccacg acggcccccc tcctccccaa
181 ggctgcgcgc gagaagccgg aggcgccggc cgagcctcca ggccccgggc ccgggtcagg
241 cgcgcacccg ggcggcagcg cccggccgga cgccaaggag gagcagcagc agcagctgcg
301 gcgcaagatc aacagccgcg agcggaagcg catgcaggac ctgaacctgg ccatggacgc
361 cctgcgcgag gtcatcctgc cctactcagc ggcgcactgc cagggcgcgc ccggccgcaa
421 gctctccaag atagccacgc tgctgctcgc ccgcaactac atcctactgc tgggcagctc
481 gctgcaggag ctgcgccgcg cgctgggcga gggcgccggg cccgccgcgc cgcgcctgct
541 gctggccggg ctgcccctgc tcgccgccgc gcccggctcc gtgttgctgg cgcccggcgc
601 cgtaggaccc cccgacgcgc tgcgccccgc caagtacctg tcgctggcgc tggacgagcc
661 gccgtgcggc cagttcgctc tccccggcgg cggcgcaggc ggccccggcc tctgcacctg
721 cgccgtgtgc aagttcccgc acctggtccc ggccagcctg ggcctggccg ccgtgcaggc
781 gcaattctcc aagtgagggc gggcctgggc ctggggcgcg acctcggccc ggcctccctt
841 cgctcagctt ctccgcgccc ctgctccctg cgtctgggag agcgaggccg agcaaggaaa
901 gcatttcgaa ccttccagtc cagaggaagg gactgtcggg cacccccttc cccgccccca
961 cccctgggac gttaaagtga ccagagcgga tgttcgatgg cgcctcgggg cagtttgggg
1021 ttctgggtcg gttccagcgg ctttaggcag aaagtgctcg ctctcaccca gcacatctct
1081 ctccttgtcc ctggagttgc gcgcttcgcg gggccgatgt agaacttagg gcgccttgcc
1141 gtggttggcg cgccccgggt gcagcgagag gccatccccg agcgctatct ccccggagcg
1201 gagcacgccg gctcccagta ctaggggctg cgctcgagca gtggcggggg cggaggggtg
1261 gttcttttcc ttctcctccg ccagaggcca cgggcgccct tgttcccgcc ggccaggtcc
1321 tatcaaagga ggctgccgga actcaagagg cagaaaaaga ccagttaggc ggtgcagacg
1381 gtctgggacg tggcagacgg acggaccctc ggcggacagg tggtcggcgt cggggtgcgg
1441 tgggtagggg cgaggacaac gcagggtgcg ctgggttggg acgtgggtcc acttttgtag
1501 accagctgtt tggagagctg tatttaagac tcgcgtatcc agtgttttgt cgcagagagt
1561 tttcgctctt aaatcctggg ggtttcttag aaagcaactt agaactcgag attcaccttt
1621 cgtttccctt tccccaaaag tagcgtaacc aacatttaag cttgcttaaa aacgaaaacc
1681 aaccgccttg catccagtgt tcccgattta ctaaaatagg taaccaggcg tctcacagtc
1741 gccgtcctgt caagagcgct aatgaacgtt ctcattaaca cgcaggagta ccgggagccc
1801 tgaaccgccc gctgctcggc ggatcccagc tgcggtggcg acggcgggaa ggcgctttcc
1861 gctgttcctc agcgggccgg gcccttgacc agcgcggccc gcaggtcttc cttctcgccg
1921 tcttgcagtt gaagagctac atacgtagtc agtttcgatt tgttacagac gttaacaaat
1981 tcctttaccc aaggttatgc tatgaccttt ccgcagttta ctttgatttt ctatgtttaa
2041 ggttttggtt gttggtagta gccgaattta actggcactt tattttactt ctaaccttgt
2101 ttcctgacgg tgtacagaat caacaaaata aaacatttaa agtctgattt tttaaaaaaa
2161 aaaaaaaa
//