LOCUS AF152516 2487 bp mRNA linear HUM 14-JUL-1999
DEFINITION Homo sapiens protocadherin gamma A9 short form protein
(PCDH-gamma-A9) variable region sequence, complete cds.
ACCESSION AF152516
VERSION AF152516.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2487)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 2487)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2487)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..2487
/db_xref="H-InvDB:HIT000071820"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
gene 1..2487
/gene="PCDH-gamma-A9"
CDS 1..2487
/gene="PCDH-gamma-A9"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma A9 short form protein"
/protein_id="AAD43776.1"
/translation="MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYI
VGNISKDLALEPRELAERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRC
LVNFKVLVEDRVKLYGIEIEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDP
DVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPELVLERALDREEATAHHLVLTASDGG
EPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGK
VAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVL
ISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHDRDSGKNGQVVCSIQENLSF
TLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLSTEIHITLQVTDINDNPP
AFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAEDTIQGSPLSTYVSIN
SDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVLDQNDNAPEILYPA
LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASEPGLFSVGLHTG
EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILADLGSLQIPA
DLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLAGVPTSHF
VGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLCVSVDSK
FPIEDTPLVPVSSFFFFLSFLFLFFVLFCF"
BASE COUNT 609 a 653 c 618 g 607 t
ORIGIN
1 atggcagctc caaccaaatg ccagctccgc ggaagattag tcctgctatg ctcgctcctg
61 gggatgctat gggaggccag ggccagtcag attcgctact cagtgcctga agagacagaa
121 aagggctata ttgtgggcaa catctccaag gacctggctc tggagccccg ggagctggcg
181 gagcgccgag tccgcatcgt ctctagaggt aggacgcagc ttttctctct gaacccgcgc
241 agcggcacct tggtcaccgc gggtaggata gaccgggagg agctctgtgc tcagagcccg
301 cggtgtctgg tgaactttaa agtcctggtt gaagacagag tgaaactgta cggaatagaa
361 atagaagtaa ctgatattaa cgacagcgcc ccaaagttcc aggccgaaag tctggaagta
421 aaaattaacg aaatcgcggt tcctggagca cgttatccac ttccagaagc tattgatccg
481 gatgttggcg tgaactccct ccagagctac cagctcagcc ccaatcacca cttctccctg
541 aacgtgcaga ctggagacaa tggagccata aacccagagc tggtgctgga gcgcgccctg
601 gacagggagg aggcaactgc ccaccacctg gtcctcacgg cctcggatgg cggcgagccg
661 cgtcgctcca gcacagtgcg catccatgtg acagtgttgg atacaaatga taatgccccg
721 gtttttgctc aacggattta ccgagttaaa gtccttgaga acgtgccccc aggcacctgg
781 ctgcttactg caacagccag cgacctggat gagggaatca acggaaaagt ggcatacaaa
841 ttctggaaaa ttaatgaaaa acaatctctg ctattccagc ttaatgaaaa tactggggaa
901 atatcaacag caaaaagtct agattatgaa gaatgttcat tttatgaaat ggaaatacaa
961 gctgaagatg gtgggggatt gaaagggtgg acaaaagtgc tcatttcggt ggaagatgta
1021 aatgacaata gacctgaagt gaccattaca tctctgttta gcccagtgag agaagacgca
1081 cctcagggaa cagtaattct tcttttcaat gctcatgacc gagactccgg gaagaatggt
1141 caagttgtct gttctatcca ggagaatcta tcttttacat tagaaaattc agaagaagat
1201 tattacagat tgttgacggc ccaaattctt gaccgagaaa aagcctcaga atataatatc
1261 acggtgactg caacagacag aggaactccg cccctgtcca cagaaattca catcaccctg
1321 caagtgactg acatcaatga taatccacct gctttctctc aagcctccta ctcagtctac
1381 ctcccggaaa acaacgccag aggtacttcc atcttctccg tgattgccta tgaccctgat
1441 agcaatgaga attctagagt tatttactcc ttggcagagg ataccatcca agggtctcct
1501 ctctccacct atgtctctat taactcagac actggtgtgc tgtatgctct gtgctccttt
1561 gactatgagc agtttagaga tttgcaaatg caggtgacgg caagtgacag tggaagccca
1621 ccacttagca gcaatgtgtc attgagactg tttgttttgg accagaatga caatgcccca
1681 gaaatcctgt accctgccct ccccactgat ggttctactg gtgtggagct ggcaccccgc
1741 tctgcagagc ctggctacct ggtgaccaag gtggtggcag tggacagaga ctcaggccag
1801 aatgcttggc tctcctaccg cctattcaag gccagtgagc cagggctctt ctcggtgggg
1861 ctgcacacag gtgaagtgcg cacagctcgg gccctgctag atagagatgc gctcaaacag
1921 agccttgtgg tggctgtaca ggaccatggc cagccccctc tctcggccac tgtcacgctc
1981 acagtagcca tagctgacag catcccagac atcctggctg acctgggcag tcttcagatc
2041 cctgcagacc tggaggcctc agaccttacc ctctacctcg ttgtggctgt ggcagtcgtc
2101 tcctgtgtct tcctcacctt cgttatcacg ctgctggccc tcaggctgag gcactggcac
2161 tcctcgcatc tgctgcgggc taccagtgat gggttggctg gtgtgcccac ctcacacttt
2221 gtgggtgtag atggggttcg agctttccta cagacctatt ctcaggagtt ctccctcacc
2281 gctgactcaa ggaagagtca cctgatcttc ccccagccca actatgcaga cacactcatc
2341 agccagcaga gctgtgagaa aaatgagcct ttgtgcgtct ctgttgattc caagtttcct
2401 atagaagaca cccctttggt tccggtgagt tcattttttt tctttctttc ttttcttttt
2461 ttgttttttg ttttgttttg tttttga
//