LOCUS AF152516 2487 bp mRNA linear HUM 14-JUL-1999 DEFINITION Homo sapiens protocadherin gamma A9 short form protein (PCDH-gamma-A9) variable region sequence, complete cds. ACCESSION AF152516 VERSION AF152516.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2487) AUTHORS Wu,Q. and Maniatis,T. TITLE A striking organization of a large family of human neural cadherin-like cell adhesion genes JOURNAL Cell 97 (6), 779-790 (1999) PUBMED 10380929 REFERENCE 2 (bases 1 to 2487) AUTHORS Wu,Q. and Maniatis,T. TITLE Human protocadherin genes JOURNAL Unpublished REFERENCE 3 (bases 1 to 2487) AUTHORS Wu,Q. and Maniatis,T. TITLE Direct Submission JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA FEATURES Location/Qualifiers source 1..2487 /db_xref="H-InvDB:HIT000071820" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /map="5q31" gene 1..2487 /gene="PCDH-gamma-A9" CDS 1..2487 /gene="PCDH-gamma-A9" /function="cell-cell adhesion" /note="member of the cadherin superfamily" /codon_start=1 /product="protocadherin gamma A9 short form protein" /protein_id="AAD43776.1" /translation="MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYI VGNISKDLALEPRELAERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRC LVNFKVLVEDRVKLYGIEIEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDP DVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPELVLERALDREEATAHHLVLTASDGG EPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGK VAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVL ISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHDRDSGKNGQVVCSIQENLSF TLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLSTEIHITLQVTDINDNPP AFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAEDTIQGSPLSTYVSIN SDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVLDQNDNAPEILYPA LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASEPGLFSVGLHTG EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILADLGSLQIPA DLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLAGVPTSHF VGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLCVSVDSK FPIEDTPLVPVSSFFFFLSFLFLFFVLFCF" BASE COUNT 609 a 653 c 618 g 607 t ORIGIN 1 atggcagctc caaccaaatg ccagctccgc ggaagattag tcctgctatg ctcgctcctg 61 gggatgctat gggaggccag ggccagtcag attcgctact cagtgcctga agagacagaa 121 aagggctata ttgtgggcaa catctccaag gacctggctc tggagccccg ggagctggcg 181 gagcgccgag tccgcatcgt ctctagaggt aggacgcagc ttttctctct gaacccgcgc 241 agcggcacct tggtcaccgc gggtaggata gaccgggagg agctctgtgc tcagagcccg 301 cggtgtctgg tgaactttaa agtcctggtt gaagacagag tgaaactgta cggaatagaa 361 atagaagtaa ctgatattaa cgacagcgcc ccaaagttcc aggccgaaag tctggaagta 421 aaaattaacg aaatcgcggt tcctggagca cgttatccac ttccagaagc tattgatccg 481 gatgttggcg tgaactccct ccagagctac cagctcagcc ccaatcacca cttctccctg 541 aacgtgcaga ctggagacaa tggagccata aacccagagc tggtgctgga gcgcgccctg 601 gacagggagg aggcaactgc ccaccacctg gtcctcacgg cctcggatgg cggcgagccg 661 cgtcgctcca gcacagtgcg catccatgtg acagtgttgg atacaaatga taatgccccg 721 gtttttgctc aacggattta ccgagttaaa gtccttgaga acgtgccccc aggcacctgg 781 ctgcttactg caacagccag cgacctggat gagggaatca acggaaaagt ggcatacaaa 841 ttctggaaaa ttaatgaaaa acaatctctg ctattccagc ttaatgaaaa tactggggaa 901 atatcaacag caaaaagtct agattatgaa gaatgttcat tttatgaaat ggaaatacaa 961 gctgaagatg gtgggggatt gaaagggtgg acaaaagtgc tcatttcggt ggaagatgta 1021 aatgacaata gacctgaagt gaccattaca tctctgttta gcccagtgag agaagacgca 1081 cctcagggaa cagtaattct tcttttcaat gctcatgacc gagactccgg gaagaatggt 1141 caagttgtct gttctatcca ggagaatcta tcttttacat tagaaaattc agaagaagat 1201 tattacagat tgttgacggc ccaaattctt gaccgagaaa aagcctcaga atataatatc 1261 acggtgactg caacagacag aggaactccg cccctgtcca cagaaattca catcaccctg 1321 caagtgactg acatcaatga taatccacct gctttctctc aagcctccta ctcagtctac 1381 ctcccggaaa acaacgccag aggtacttcc atcttctccg tgattgccta tgaccctgat 1441 agcaatgaga attctagagt tatttactcc ttggcagagg ataccatcca agggtctcct 1501 ctctccacct atgtctctat taactcagac actggtgtgc tgtatgctct gtgctccttt 1561 gactatgagc agtttagaga tttgcaaatg caggtgacgg caagtgacag tggaagccca 1621 ccacttagca gcaatgtgtc attgagactg tttgttttgg accagaatga caatgcccca 1681 gaaatcctgt accctgccct ccccactgat ggttctactg gtgtggagct ggcaccccgc 1741 tctgcagagc ctggctacct ggtgaccaag gtggtggcag tggacagaga ctcaggccag 1801 aatgcttggc tctcctaccg cctattcaag gccagtgagc cagggctctt ctcggtgggg 1861 ctgcacacag gtgaagtgcg cacagctcgg gccctgctag atagagatgc gctcaaacag 1921 agccttgtgg tggctgtaca ggaccatggc cagccccctc tctcggccac tgtcacgctc 1981 acagtagcca tagctgacag catcccagac atcctggctg acctgggcag tcttcagatc 2041 cctgcagacc tggaggcctc agaccttacc ctctacctcg ttgtggctgt ggcagtcgtc 2101 tcctgtgtct tcctcacctt cgttatcacg ctgctggccc tcaggctgag gcactggcac 2161 tcctcgcatc tgctgcgggc taccagtgat gggttggctg gtgtgcccac ctcacacttt 2221 gtgggtgtag atggggttcg agctttccta cagacctatt ctcaggagtt ctccctcacc 2281 gctgactcaa ggaagagtca cctgatcttc ccccagccca actatgcaga cacactcatc 2341 agccagcaga gctgtgagaa aaatgagcct ttgtgcgtct ctgttgattc caagtttcct 2401 atagaagaca cccctttggt tccggtgagt tcattttttt tctttctttc ttttcttttt 2461 ttgttttttg ttttgttttg tttttga //