LOCUS LJ661272 923 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69521.graph_c0_seq1.
ACCESSION LJ661272
VERSION LJ661272.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 923)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..923
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69521.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 226 a 218 c 189 g 290 t
ORIGIN
1 tttttttttt tttttttcat gcaaattgtt tatttcacac tgtgtgctac agattgtcgc
61 attggcgacg cagccaagca tgcccttcca tgccttcgcg cgcagcgcgt tgcaattgcc
121 ttgttaaatt cacagtgatg gatcattttc gatatgttcc tctcgcgtca catatcccct
181 tataacagtt aatcgcgctt taacgaattg ggggaaccgc cggatttgta ttcatatctt
241 ctcgcatatc ccattgacga aagaagtctg ttttactcgc attagaagga aaaaagacag
301 attattacga tcctaatttt tatgtcgctg aaccacgtac aaagtggttg gactgatttc
361 ttaaatgtat cacgtcctgt ctcgcttatt aatttatatt agagctctat cgagtaacta
421 actgtctccg cttatcaggt aaaaatctat tatgtagcaa atcatcaata acaaatgtct
481 atatctattc tttacacagg atattattca ttttctaata ctaatcggcg atcgcgcgga
541 ggctaccgtc ggagaagacg tttaatacga gatcatgacg tagtccgttc tgaaaccccg
601 acgatcgaca gcgtactgat tgtccgcctg gcactcgtaa tatccggcgt ccttctgcgt
661 cgcagggtcg atctccattt tcgactttat cgtgtcgtta ccaacgggcc actcgtgcac
721 ctggaaaaat ttgtgatggt acagctcgat cccgtccttc agccaagtga tctccggtcg
781 cgggataccg atcgccatgc agaagaacgt gatctttctg cccagcatgt aatccaattc
841 aaagtgagac gccttcacga tcttggcacc atccttgttt tcgtaatagt gcgtactggc
901 gggatttcga ttgggtatca gga
//