LOCUS LJ650707 1157 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68830.graph_c4_seq12.
ACCESSION LJ650707
VERSION LJ650707.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1157)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1157
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68830.graph_c4_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 366 a 190 c 225 g 376 t
ORIGIN
1 atttctcata gtatatgttc tgtgcctctg cgtgatccag aactcccaca gagatttttg
61 ctgattcatt ttcattagaa ggatggccgt atcgttccca gttcgttggc gtggaaacgg
121 gtgctattaa tcataagaag aagagtgaat acatcgtgat gaataagacg tatttaaaaa
181 acgctgaacc actttaagaa ataatcagca atatcaatta ttcgagatgg tgcttgcgga
241 attaattgcg ggttttattg ttatcttgag tagtgtgtac atttattata aatatgtaat
301 atttaatttc tggcgtaaga gaggtgtctt ttatatcgaa cccgttgttc caattggaaa
361 tatagcacct cttgtaattg ggaaatctca aataggtgta tttttccatg atatatattt
421 aaaatataag gatcatccgg tttttggaac gtattcactt tttaaaccaa atttggtagt
481 cgccgatctt gatcttattc gaacgctgtt gataaaagaa tttaagtctt ttcatgatcg
541 tggagcgtat tgtaacgaaa aggttgatcc cttgactgac catttgttcc tcacatctgg
601 aaaaaaatgg cgaaatatgc gcgccaagat gacaccaacg tttacttcgg gaaaaatgaa
661 gcagatgttt gttattctga aagagtgtgg tgaagaactt gcaaagtatc tagatagtaa
721 agctcaaacg agagattcca ttgaaataaa agatacattt ggaagatata caacagacgt
781 tatcatgtca gccgcttttg gtatcaaatc taattgtatt gaggaaccca ataatgagta
841 ccgcgttcaa ggaaaaaaaa tttttgattt aaattctatt aagctcgcac tggctatgtt
901 tgcaccgcaa gtaatggact tcctttctat tcccatcacg gcacagtctg tcactgactt
961 ttatatgaaa atgtttcgag agactgtgga atataggcaa actaatcata tcgtcagacc
1021 tgactttgtg aacttgctca tacaactcat ggagaggggc tacgttgatc ctgaagatga
1081 caaaaatacg tccaacgttt catgttaata tacacagata acgtttatta ttatatttat
1141 aatatatcat gttacac
//