LOCUS       LC364449                 853 bp    DNA     linear   BCT 08-FEB-2018
DEFINITION  Pseudomonas syringae SUPP783 rpoD gene for RNA polymerase sigma
            factor, partial cds.
ACCESSION   LC364449
VERSION     LC364449.1
KEYWORDS    .
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Takikawa,Y. and Miyazaki,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Yuichi Takikawa
            Shizuoka University, Plant pathology laboratory; 836 Ohya,
            Shizuoka, Shizuoka 422-8529, Japan
REFERENCE   2
  AUTHORS   Takikawa,Y. and Miyazaki,S.
  TITLE     Phylogenetic analysis of kiwifruit bacterial blossom blight
            pathogen and development of its specific detection method using PCR
  JOURNAL   Unpublished (2018)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..853
                     /collected_by="Takikawa Yuichi"
                     /collection_date="1987"
                     /country="Japan:Hiroshima"
                     /db_xref="taxon:317"
                     /host="Actinidia deliciosa"
                     /mol_type="genomic DNA"
                     /organism="Pseudomonas syringae"
                     /strain="SUPP783"
     CDS             <1..>853
                     /codon_start=2
                     /gene="rpoD"
                     /product="RNA polymerase sigma factor"
                     /protein_id="BBC70639.1"
                     /transl_table=11
                     /translation="TVELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVDHILSEYTR
                     VTSEGGRLSDVLSGYIDPDDGIAPPAEVPPPVDPKAVKAEGTDDDEEESADASDDEDE
                     VESGPDPVIAQQRFGAVSDQMEITRKALKKFGRDDKHAIAEMVALAELFMPIKLVPKQ
                     FEGLVERVRGALERLRAQERAIMQLCVRDARMPRADFLRQFPGNEVDESWTDALAKGK
                     SKYAEAIGRLQPDIQRCQQKLSALEEETGLKIAEIKDINRRMSIGEAKARRAKKEMVE
                     ANLRLVIS"
BASE COUNT          206 a          242 c          249 g          156 t
ORIGIN      
        1 taccgttgaa cttctgaccc gtgaaggcga aatcgaaatc gccaaacgta tcgaagaagg
       61 catccgtgaa gtgatgggcg caattgcgca cttccctggc acggttgacc atattctttc
      121 cgaatacaca cgtgtcacca gtgaaggcgg tcgcctctcc gatgttctga gcggctatat
      181 cgacccggac gacggcattg cgccgcctgc cgaagtacct ccgcctgtcg atcccaaagc
      241 cgtcaaggcc gaaggcaccg atgacgacga ggaagaatcg gcagacgcca gcgacgacga
      301 agacgaagtc gaaagcggtc ccgatccggt catcgcccag cagcgcttcg gtgcggtttc
      361 cgaccaaatg gaaatcaccc gcaaggcgct gaagaaattc ggtcgcgacg acaagcacgc
      421 cattgccgaa atggttgcac ttgccgaact gttcatgccg atcaaactgg ttccaaagca
      481 gtttgaaggt ctggtagagc gtgtgcgggg tgctcttgag cgtcttcgtg ctcaggaacg
      541 cgccatcatg cagctgtgtg tacgtgatgc acgtatgccg cgcgccgact tccttcgcca
      601 gttcccgggc aacgaagttg acgaaagctg gactgacgca ctggccaagg gcaagagcaa
      661 atacgccgaa gccattggtc gtctgcagcc tgacatccag cgttgccagc agaagctgtc
      721 ggcactggaa gaagagaccg gcctgaaaat agccgagatc aaggacatca accgtcgcat
      781 gtcgatcggt gaggccaagg cccgccgcgc gaagaaagag atggttgaag cgaacttgcg
      841 tctggttatc tcc
//