LOCUS KP784688 2271 bp mRNA linear PLN 12-JUL-2017
DEFINITION Barbarea vulgaris subsp. arcuata LUP2-G mRNA, complete cds.
ACCESSION KP784688
VERSION KP784688.1
KEYWORDS .
SOURCE Barbarea vulgaris subsp. arcuata
ORGANISM Barbarea vulgaris subsp. arcuata
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Cardamineae; Barbarea.
REFERENCE 1 (bases 1 to 2271)
AUTHORS Khakimov,B., Kuzina,V., Erthmann,P.O., Fukushima,E.O.,
Augustin,J.M., Olsen,C.E., Scholtalbers,J., Volpin,H.,
Andersen,S.B., Hauser,T.P., Muranaka,T. and Bak,S.
TITLE Identification and genome organization of saponin pathway genes
from a wild crucifer, and their use for transient production of
saponins in Nicotiana benthamiana
JOURNAL Plant J. 84 (3), 478-490 (2015)
PUBMED 26333142
REFERENCE 2 (bases 1 to 2271)
AUTHORS Erthmann,P., Poulsen,V.K., Augustin,Jm. and Bak,S.
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2015) Plant and Environmental Sciences,
University of Copenhagen, Thorvaldsensvej 40, T122, Frederiksberg C
1871, Danmark
FEATURES Location/Qualifiers
source 1..2271
/organism="Barbarea vulgaris subsp. arcuata"
/mol_type="mRNA"
/sub_species="arcuata"
/db_xref="taxon:767412"
CDS 1..2271
/codon_start=1
/product="LUP2-G"
/protein_id="ALR73778.1"
/translation="MWKLKIGKGGEDPYLFSSNNFVGRQTWEFDPNAGTLEERAAVEE
ARWRFLDNRSRVKSCSDLLWRMQFLREAKFEQVIPPVKIDDGEGVTHKNATDALRRGV
SFFSALQASDGHWPAEITGPLFFLPPLVFCLYITGHLELIFYAEHRKEMLRYIYCHQN
DDGGWGLHVEGKSVMFCTALNYICLRILEEGPSGGPDNACARARQWILDRGGVTYIPS
WGKVWLSILGIYDWSGTNPMPPELWLLPSFIPIHPGNILCYTRMVYMPMSYLYGKRFV
GPLTPLIKLLRKELLLQPYEEINWNKARRLYAKEDMFYPHPLVQDLIWDTLHIFVEPL
LTRWPLNKLVREKALRVAMEHIHYEDENSHYITIGCVEKVLCMLACWIENPNGAHFKK
HLARIPDFMWVAEDGLKMQSFGSQLWETGFAIQALLASDLCGETDDVLRKGHSYLKNS
QIRENPSGDFKSMYRHISKGAWTLSDRDHGLQVSDCTAEALKCCMLLSMMPAEVVGQE
IDSEQLYDSVNLLLSLQSDNGGLTAWEPIRAHEWLELLNPTDFFTKVMVECEYVECTS
AVIQALVLFKQLYPDHRTEEIIKSIEKAVQFIESKQKPDGSWYGNWGVCFIYATWFAL
SGLAAAGKTYKSCVAMRKGVDFLLTIQKENGGWGESNLSAPEQRYIPLEGNRSNLVQT
AWAMMGLIHAGQAERDPVPLHRAAKLIITSQLENGDFPQQEIVGVFMNTCLLQYGLYR
NTFPLWALAVYRKAAF"
BASE COUNT 627 a 464 c 556 g 624 t
ORIGIN
1 atgtggaagt tgaagatagg aaagggagga gaagacccat acttattcag cagcaacaat
61 ttcgtcggac gtcaaacatg ggagtttgat cccaatgccg gcacactgga ggaacgagcc
121 gccgtcgaag aagctcgctg gagattttta gataaccgtt cccgtgttaa aagttgcagt
181 gatctcttgt ggcgaatgca atttttgaga gaggcaaaat tcgagcaagt gatcccgccg
241 gtgaagattg acgacggcga aggcgtaacg cataaaaatg cgacggatgc tttgcggaga
301 ggagtttctt tcttctcggc tttgcaggcc tccgatggcc actggccggc agaaatcacc
361 ggacctctct tcttccttcc cccattggta ttttgtttgt atatcacagg acatctcgag
421 ttgatattct atgcagaaca tcgcaaagag atgcttcgat atatctattg tcaccagaat
481 gatgatggtg gatggggatt acacgttgaa ggcaagagcg ttatgttctg caccgcactt
541 aattacattt gcttgcgtat tctcgaagaa ggtcccagtg gaggaccaga taatgcctgc
601 gcacgagcca ggcaatggat tcttgaccgt ggtggtgtga cctatattcc ttcttgggga
661 aaagtttggc tctcgatact tggaatctat gattggtctg gaaccaaccc gatgcctcca
721 gagctctggt tgctaccttc tttcattcca atacacccag gaaatatttt gtgttatact
781 cggatggttt atatgcccat gtcttaccta tatgggaaaa gatttgttgg tcctctaaca
841 cctcttatca agctattgcg caaagaactc ctcttacaac cttacgagga aatcaattgg
901 aataaagcgc gccgtctata tgcaaaagaa gacatgtttt atcctcatcc tctggttcaa
961 gatttgatat gggacactct tcacatcttt gtggagcctt tacttacaag atggccgtta
1021 aacaagcttg taagggaaaa ggcccttcgg gtggcaatgg aacacataca ttacgaggat
1081 gaaaatagcc attatattac catcggatgt gttgagaagg ttctgtgcat gcttgcttgc
1141 tggattgaga atccgaatgg agctcatttt aagaaacatc ttgctagaat tccggacttc
1201 atgtgggtag ctgaagacgg actgaaaatg cagagctttg gaagtcaact ctgggaaaca
1261 gggtttgcaa ttcaagcttt gcttgctagt gatctttgtg gtgaaactga tgatgtactc
1321 aggaaaggac acagttacct aaaaaattct cagattagag aaaatccttc aggtgacttt
1381 aagagcatgt accgccacat ttccaaagga gcatggactt tgtctgatcg agatcacgga
1441 ttgcaagttt cagattgtac agctgaagct ttgaagtgtt gcatgcttct ctccatgatg
1501 ccagctgagg tcgttggcca ggaaatagat tctgaacaac tatacgattc tgttaatctc
1561 ttgctatcgt tacagagtga taatggcggt ttgactgcat gggagcccat ccgtgcacat
1621 gaatggttgg aattgctcaa tcccacagat ttttttacta aggtaatggt cgaatgtgag
1681 tacgtggaat gtacctcagc tgttatacaa gctttggttt tgttcaaaca actttatcca
1741 gatcacagga cagaagagat catcaagtcg atcgagaaag cagtgcaatt catagaaagc
1801 aaacaaaagc cagacggttc atggtatgga aactggggtg tttgtttcat ttatgccaca
1861 tggtttgctc ttagcggcct agcagccgct ggtaaaactt acaaaagctg tgtggctatg
1921 cgcaagggtg tagattttct tcttacgata cagaaagaaa atggaggttg gggcgaaagc
1981 aatctgtcag cccctgagca gagatacata ccattagaag ggaacagatc aaacctagtg
2041 caaaccgcat gggctatgat gggtctgatt cacgctggac aggcggagag agatcctgta
2101 cctcttcatc gtgctgcgaa acttatcatc acttcgcagc tggaaaatgg agatttccct
2161 caacaggaaa tagtaggagt gttcatgaat acatgcttgc tacaatatgg tttatacaga
2221 aacaccttcc cattatgggc cctcgcggtg tatcggaaag ctgccttctg a
//