LOCUS       JX290224                1217 bp    RNA     linear   VRL 22-SEP-2012
DEFINITION  HIV-1 isolate 10RU6818 from Russia pol protein (pol) gene, partial
            cds.
ACCESSION   JX290224
VERSION     JX290224.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Molecular epidemiology of HIV-1 in Novosibirsk region, Russia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2012) Department of Retroviruses, State Research
            Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk
            region 630559, Russia
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Human immunodeficiency virus 1"
                     /mol_type="genomic RNA"
                     /isolate="10RU6818"
                     /host="Homo sapiens"
                     /db_xref="taxon:11676"
                     /country="Russia: Novosibirsk"
                     /collection_date="2010"
                     /note="subtype: A1"
     gene            <1..>1217
                     /gene="pol"
     CDS             <1..>1217
                     /gene="pol"
                     /codon_start=1
                     /product="pol protein"
                     /protein_id="AFR77677.1"
                     /translation="SFNFPQITLWQRPLVTVRVGGQIKEALLDTGADDTVLEDIDLPG
                     KWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLIGPTPVNIIGRNMLTQIGCTLN
                     FPISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALIEICEEMEKEGKISKIGPENPYN
                     TPVFVIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAY
                     FSVPLDENFRKYTAFTIPSTNNETPGIRYQYMVLPQGWKGSPSIFQSSMTKILEPFRL
                     KNPEIVIYQYMDDLYVGSDLEIGKHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMG
                     YELHPDKWTVQPIMLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKAL
                     TEIVTLTEEAELE"
BASE COUNT          469 a          197 c          259 g          291 t
ORIGIN      
        1 tccttcaatt tccctcaaat cactctttgg caacgacccc ttgtcacagt aagagtagga
       61 ggacagataa aagaagctct attagataca ggagcagatg atacggtatt agaagacata
      121 gatttgccag gaaaatggaa accaaaaatg atagggggaa ttggaggttt tatcaaagta
      181 agacagtatg atcagatact tatagaaatt tgtggaaaaa aggctatagg tacggtatta
      241 atagggccta cccctgtcaa cataattgga aggaatatgt tgactcagat tggttgtact
      301 ttaaattttc caataagccc tattgaaact gtaccagtaa cattaaagcc aggaatggat
      361 ggcccaaagg ttaaacaatg gccattaaca gaagagaaaa taaaagcatt aatagaaatt
      421 tgtgaagaga tggaaaagga aggaaaaatt tcaaaaattg ggcctgaaaa tccatacaat
      481 actccagtat ttgttataaa gaaaaaagat agcactaagt ggagaaaatt agtagatttc
      541 agggagctca ataaaagaac ccaggacttt tgggaagtcc aattaggaat accccatcca
      601 gcgggtttaa aaaagaaaaa atcagtaaca gtactggatg tgggggatgc atatttctca
      661 gttcctttag atgaaaactt tagaaagtat actgcattca ctataccaag tacaaacaat
      721 gagacaccag ggatcagata tcaatacatg gtactccccc agggatggaa aggatcacca
      781 tcaatattcc agagtagcat gacaaaaatc ttagagccat tcagattaaa aaatccagaa
      841 atagttatct atcaatacat ggatgacttg tatgtaggct ctgatttaga aatagggaaa
      901 catagagcaa aaatagagga gttragagct catctattga gctggggatt tactacacca
      961 gacaaaaagc atcagaaaga gcctccattt ctttggatgg gatatgaact ccatcctgac
     1021 aaatggacag tccagcctat aatgctacca gagaaagaca gctggactgt caatgatata
     1081 cagaaattag tgggaaaact aaattgggca agtcagattt atccagggat taaagtaaag
     1141 caattgtgta aactcctcag gggagccaaa gcactgacag aaatagtgac actgactgag
     1201 gaagcagaat tagaatt
//