LOCUS       JO316566                 523 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c57227_c mRNA sequence.
VERSION     JO316566.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Nitella hyalina"
BASE COUNT          113 a          139 c          157 g          114 t
        1 cggacggact tgaggcgaga aagctatggc ggcaatggcg acggcttcga ccacatttac
       61 cagccgctgt gctggcggcc aattagctgc tgcgacttcc gggcttgcaa cgggatctca
      121 gacgaggcag caacaacagc aaggcattgt cttctggtcg cggaacttga acgagtaccc
      181 cagcacgtcg atccaggccg tccaatgcgg atcatccgct gggtcggagg tgttcggtaa
      241 ctcatccatg gctggattga ggcaaccaag cttgaaggcc gtgatgacgc gtggcactgc
      301 atcgaccggc attgtgtgca aggtgtccaa gggtgacgtg gcaccaccac tttctctcaa
      361 ggatcagaat ggcaaagttg tcaacttgtc gaagtttagg ggcaagaacg ttgtcctcta
      421 cttctatccc gcagacgaca cccctggatg cactaaggag gcatgtgctt tccgtgatgc
      481 ctatcaggat ttccgcaggg ccggtgccgt ggtcattggt att