LOCUS HO398272 437 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c43005_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO398272
VERSION HO398272.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 437)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..437
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 144 a 105 c 79 g 109 t
ORIGIN
1 cgggacaaga ctacaacaag accatctata atataatttt ataatgtcgg ataagaagaa
61 caagcaagaa acctctgaag ctaatcccaa ggctttccct ctcgcaaatc ccaacttgac
121 agttaccatt ttggatttgg ttaaccaagc atcaaactac aaacaactta agaagggagc
181 caatgaagcc accaagacac tgaatcgagg tatcgcttct ctcatcgttt tggctgctga
241 cacagaacca attgaaattc ttttgcacct cccccttttg tgcgaagata agaacgttcc
301 ctatgttttc gttcctagca aggttgctct tggccgatct tgcggtgtca gccgaccggt
361 catcgctgct tcgatcttga acaacgaaga atcagaactt aaagatcaaa tcaacaaaat
421 gaaagatcaa atcgaaa
//