LOCUS GS598854 735 bp DNA linear GSS 04-NOV-2010 DEFINITION LinPja01_S10A1 LinPja01 Leishmania infantum genomic clone S10A1, genomic survey sequence. ACCESSION GS598854 VERSION GS598854.1 DBLINK BioSample: SAMN00188205 KEYWORDS GSS. SOURCE Leishmania infantum ORGANISM Leishmania infantum Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Leishmaniinae; Leishmania. REFERENCE 1 (bases 1 to 735) AUTHORS Alcolea,P.J., Alonso,A., Gomez,M.J., Moreno,I., Dominguez,M., Parro,V. and Larraga,V. TITLE Transcriptomics throughout the life cycle of Leishmania infantum: High down-regulation rate in the amastigote stage JOURNAL Int. J. Parasitol. 40 (13), 1497-1516 (2010) PUBMED 20654620 COMMENT Contact: Gomez MJ Bioinformatics Lab Centro de Astrobiologia INTA-CSIC Ctra. Torrejon-Ajalvir Km4. Torrejon de Ardoz, 28850 Madrid, Spain Tel: 34 915206415 Fax: 34 915201074 Email: gomezrmj@inta.es Class: shotgun. FEATURES Location/Qualifiers source 1..735 /organism="Leishmania infantum" /mol_type="genomic DNA" /isolate="MCAN/ES/98/10445" /db_xref="taxon:5671" /clone="S10A1" /clone_lib="SAMN00188205 LinPja01" /dev_stage="Stationary phase promastigotes" /lab_host="Escherichia coli DH10B" /note="Vector: pUC18; Site_1: BamHI; Total DNA from L. infantum was partially digested with Sau3AI. Fragments of size 2-11 Kbp were purified through 10-40% sucrose gradient isopicnic centrifugation and ligated into BamHI-digested pUC18." BASE COUNT 114 a 238 c 224 g 109 t ORIGIN 1 gtgaggttgt ctttgcccgc ttgcgtctag aggaacatga ctggtgggct gctttaattg 61 atctgccatc acgcgaggag annnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 121 nnnnnnnnnn ngccggcacc caccacaacc acacatgtgg caccccgtct gccctccctc 181 catcactcag ttcgaggagt ccctgcggtg tgcgcgaggg ggcgaggcag agacggggga 241 gagggggcgc gggagagaca ccacaaacac gcgcggcggc gactgcgagg cacggagggt 301 ggacggaggc tggtgaccga tgcggtgagg cgttgcgtct cccgccgcgc tcctttcgct 361 gccctcgccg ccgcgctcct tcgcattccc gcgttgaggt ccggccagcg acggccgcgc 421 caccccctcg cttcccctct cgcgctctcg cttcgcaaag ggtgcgctgc ccactgcaaa 481 gcgccgggcg ccgtgcagca cagcagaggc aaaagcgaag agggagcggc ggcaactcag 541 cggaagacac gcgctgggga ggggacgagg acgaggacgt cccggtggag ctgccgcgcc 601 gccgtcgagt tcgcccgtcg ctccctgcgg cactctccct cctactcctc cggtgttgtc 661 tgagactcct tctcctgctc cgtagattcc gcaccctcac cagactcccc aatagacaac 721 gggcccatca ggaag //