LOCUS FX985241 849 bp mRNA linear TSA 19-APR-2017
DEFINITION TSA: Reticulitermes speratus CTL4A mRNA for putative CTL4 isoform
A, complete cds, contig: comp784003_c0_seq1.
ACCESSION FX985241
VERSION FX985241.1
DBLINK BioProject:PRJDB3531
Sequence Read Archive:DRR030795, DRR030796, DRR030797, DRR030798,
DRR030799, DRR030800, DRR030801, DRR030802, DRR030803, DRR030804,
DRR030805, DRR030806, DRR030807, DRR030808, DRR030809, DRR030810,
DRR030811, DRR030812, DRR030813, DRR030814, DRR030815, DRR030816,
DRR030817, DRR030818, DRR030819, DRR030820, DRR030821, DRR030822,
DRR030823, DRR030824, DRR030825, DRR030826, DRR030827, DRR030828,
DRR030829, DRR030830, DRR030831, DRR030832, DRR030833, DRR030834,
DRR030835, DRR030836, DRR030837, DRR030838, DRR030839, DRR030840,
DRR030841, DRR030842, DRR030843, DRR030844, DRR030845, DRR030846,
DRR030847, DRR030848, DRR030849, DRR030850, DRR030851, DRR030852,
DRR030853, DRR030854
BioSample:SAMD00026264, SAMD00026265, SAMD00026266, SAMD00026267,
SAMD00026268, SAMD00026269, SAMD00026270, SAMD00026271,
SAMD00026272, SAMD00026273, SAMD00026274, SAMD00026275,
SAMD00026276, SAMD00026277, SAMD00026278, SAMD00026279,
SAMD00026280, SAMD00026281, SAMD00026282, SAMD00026283,
SAMD00026284, SAMD00026285, SAMD00026286, SAMD00026287,
SAMD00026288, SAMD00026289, SAMD00026290, SAMD00026291,
SAMD00026292, SAMD00026293, SAMD00026294, SAMD00026295,
SAMD00026296, SAMD00026297, SAMD00026298, SAMD00026299,
SAMD00026300, SAMD00026301, SAMD00026302, SAMD00026303,
SAMD00026304, SAMD00026305, SAMD00026306, SAMD00026307,
SAMD00026308, SAMD00026309, SAMD00026310, SAMD00026311,
SAMD00026312, SAMD00026313, SAMD00026314, SAMD00026315,
SAMD00026316, SAMD00026317, SAMD00026318, SAMD00026319,
SAMD00026320, SAMD00026321, SAMD00026322, SAMD00026323
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Reticulitermes speratus
ORGANISM Reticulitermes speratus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea;
Blattoidea; Termitoidae; Rhinotermitidae; Reticulitermes;
Frontotermes.
REFERENCE 1 (bases 1 to 849)
AUTHORS Mitaka,Y., Kobayashi,K. and Matsuura,K.
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2016) to the DDBJ/EMBL/GenBank databases.
Contact:Kenji Matsuura
Kyoto University, Laboratory of Insect Ecology, Graduate School of
Agriculture; Kitashirakawa Oiwake-cho, Kyoto, Kyoto 606-8502, Japan
REFERENCE 2
AUTHORS Mitaka,Y., Kobayashi,K. and Matsuura,K.
TITLE Caste-, sex-, and age-dependent expression of immune-related genes
in a Japanese subterranean termite, Reticulitermes speratus
JOURNAL PLoS ONE 12, e0175417 (2017)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pone.0175417
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. trinityrnaseq_r2012-04-27
Sequencing Technology :: illumina Hiseq2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..849
/db_xref="taxon:60591"
/mol_type="mRNA"
/note="contig: comp784003_c0_seq1"
/organism="Reticulitermes speratus"
/tissue_type="whole body"
CDS 84..701
/codon_start=1
/gene="CTL4A"
/product="putative CTL4 isoform A"
/protein_id="BAX07254.1"
/transl_table=1
/translation="MARLLSCSLLVLASLCLVHTRPYHEEKHRALLRSGYVYFPGGGY
YRLAYKTPVVWAEARRNCQQEGATLAVVNSEKEADNLRSLYLNNGPVKRERDGGWSDS
YDTNVLAESTVDPIPTPTPDVPTPTPAPANATIHIGFHDIFIEGEYLTVRNEPLIMAG
FIRWKVGYPIADDEHNCGGFDTGKFILDNPCDVKLPYVCEIPEVY"
BASE COUNT 271 a 188 c 200 g 190 t
ORIGIN
1 atcaacgcag agtacatggg ggaacaactg tttgttagaa cagagcgact aaaaggaaac
61 atttgtctct aatatcacca aacatggcaa gactgttgag ctgttcattg ttggtgttgg
121 caagcctgtg tctggttcac acaaggcctt accacgaaga gaagcacaga gccctactca
181 gaagtggata tgtctacttt cctggtggcg ggtattacag gctcgcctac aagacgcccg
241 tagtatgggc cgaggctcgc cgaaactgtc agcaagaagg cgcgacactg gccgtagtca
301 actctgaaaa ggaggcggac aatctccgct ctttgtatct caataacggg cctgttaaga
361 gagaaagaga tggcggctgg agtgacagtt acgatacaaa tgtattggca gagagcacag
421 tcgacccaat accaacacca acaccagatg taccaacacc aacaccagca cccgccaacg
481 caacaattca catcggtttt cacgacatct ttatcgaggg cgaatacctc acagtccgca
541 atgagccact cataatggca ggatttatac gctggaaggt tgggtaccca atagcagatg
601 atgaacacaa ctgtggaggt ttcgacaccg gcaagttcat tttggacaac ccttgtgacg
661 taaaattgcc ttacgtctgt gagatacctg aagtatactg agagaactgc aaagttgtga
721 agactctatt tagtaactaa tggatttacg tagcgatgtc aagaatggac tgcatattgt
781 accacgttac actgcagtag ataatactag tagaaataaa gtcagctttt gaaaaaaaaa
841 aaaaaaaaa
//