LOCUS FX983171 1507 bp mRNA linear TSA 13-JAN-2017
DEFINITION TSA: Reticulitermes speratus RsPHGPX mRNA for putative
phospholipid hydroperoxide glutathione peroxidase, complete cds,
contig: comp780877_c0_seq2.
ACCESSION FX983171
VERSION FX983171.1
DBLINK BioProject:PRJDB3531
Sequence Read Archive:DRR030795, DRR030796, DRR030797, DRR030798,
DRR030799, DRR030800, DRR030801, DRR030802, DRR030803, DRR030804,
DRR030805, DRR030806, DRR030807, DRR030808, DRR030809, DRR030810,
DRR030811, DRR030812, DRR030813, DRR030814, DRR030815, DRR030816,
DRR030817, DRR030818, DRR030819, DRR030820, DRR030821, DRR030822,
DRR030823, DRR030824, DRR030825, DRR030826, DRR030827, DRR030828,
DRR030829, DRR030830, DRR030831, DRR030832, DRR030833, DRR030834,
DRR030835, DRR030836, DRR030837, DRR030838, DRR030839, DRR030840,
DRR030841, DRR030842, DRR030843, DRR030844, DRR030845, DRR030846,
DRR030847, DRR030848, DRR030849, DRR030850, DRR030851, DRR030852,
DRR030853, DRR030854
BioSample:SAMD00026264, SAMD00026265, SAMD00026266, SAMD00026267,
SAMD00026268, SAMD00026269, SAMD00026270, SAMD00026271,
SAMD00026272, SAMD00026273, SAMD00026274, SAMD00026275,
SAMD00026276, SAMD00026277, SAMD00026278, SAMD00026279,
SAMD00026280, SAMD00026281, SAMD00026282, SAMD00026283,
SAMD00026284, SAMD00026285, SAMD00026286, SAMD00026287,
SAMD00026288, SAMD00026289, SAMD00026290, SAMD00026291,
SAMD00026292, SAMD00026293, SAMD00026294, SAMD00026295,
SAMD00026296, SAMD00026297, SAMD00026298, SAMD00026299,
SAMD00026300, SAMD00026301, SAMD00026302, SAMD00026303,
SAMD00026304, SAMD00026305, SAMD00026306, SAMD00026307,
SAMD00026308, SAMD00026309, SAMD00026310, SAMD00026311,
SAMD00026312, SAMD00026313, SAMD00026314, SAMD00026315,
SAMD00026316, SAMD00026317, SAMD00026318, SAMD00026319,
SAMD00026320, SAMD00026321, SAMD00026322, SAMD00026323
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Reticulitermes speratus
ORGANISM Reticulitermes speratus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea;
Blattoidea; Termitoidae; Rhinotermitidae; Reticulitermes;
Frontotermes.
REFERENCE 1 (bases 1 to 1507)
AUTHORS Tasaki,E., Kobayashi,K., Iuchi,Y. and Matsuura,K.
TITLE Direct Submission
JOURNAL Submitted (09-MAY-2016) to the DDBJ/EMBL/GenBank databases.
Contact:Yoshihito Iuchi
Yamaguchi University, Graduate School of Agriculture; Oji yoshida
1677-1, Yamaguchi, Yamaguchi 753-8515, Japan
REFERENCE 2
AUTHORS Tasaki,E., Kobayashi,K., Matsuura,K. and Iuchi,Y.
TITLE An Efficient Antioxidant System in a Long-Lived Termite Queen
JOURNAL PLoS ONE 12, e0167412 (2017)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pone.0167412
REFERENCE 3
AUTHORS Mitaka,Y., Kobayashi,K., Mikheyev,A., Tin,M.M.Y., Watanabe,Y. and
Matsuura,K.
TITLE Caste-Specific and Sex-Specific Expression of Chemoreceptor Genes
in a Termite.
JOURNAL PLoS ONE 11, e0146125 (2016)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pone.0146125
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. trinityrnaseq_r2012-04-27
Sequencing Technology :: illumina Hiseq2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1507
/db_xref="taxon:60591"
/mol_type="mRNA"
/note="contig: comp780877_c0_seq2"
/organism="Reticulitermes speratus"
CDS 519..1028
/codon_start=1
/gene="RsPHGPX"
/product="putative phospholipid hydroperoxide glutathione
peroxidase"
/protein_id="BAV93789.1"
/transl_table=1
/translation="MAATPEDWKNASSIYDFTVKDIKGQDVSLEKYRGDVAIIVNVAS
KCGLTPTNYKELAELHDKYAESKGLRILAFPCNQFNSQEPGNAEEIVCFARSKNANFD
MFEKIDVNGNHAHPLWKYLKHKQGGTLGDFIKWNFTKFIIDKNGQPVERHGPNVDPSK
LVSSLEKYW"
BASE COUNT 457 a 268 c 348 g 434 t
ORIGIN
1 atcaacgcag agtacatggg gacccacggc cagtgtgcca tgccggctac agtatcgcac
61 taaggcaccg cataaggcgg tttaatgttg ttttcattga ggtctgtggt cattacgtgt
121 gattaactgt cactgtggtt gctgtttcca cctacgcaga atgcgcaagt gatgacagtt
181 gtttatcgtg tgaggtttgt gaagacgcat atcagggttg aagtttgaag gtcaacctat
241 caggcgagta aaaataaacc agtacagtta attttcatca tgacttgcta gagttcacat
301 gtagaagaga ggagtaggga agtgtcggca gactgcatat cgattggtaa gggtgatata
361 ggcaggtatt cgtcagtatt cgaactgcat tagcggaaga tgggcataac ttcgagtcag
421 taaaggaatt tgcttataaa gtcaaatccg aaggactgca gttatttgga actgcatttt
481 gcgctctgcg actcttgtcc acacgtaccg ccccagtcat ggcggcaact ccagaagatt
541 ggaaaaatgc atcatccatc tatgatttca ctgtaaaaga tataaaaggg caagatgtgt
601 ctctggagaa atacagaggt gatgtggcca ttattgtgaa tgtagcctca aagtgtggcc
661 tgactcccac aaattacaag gaattggcag agcttcatga caagtatgct gaatcgaaag
721 gtctccgcat attagctttc ccttgcaacc agtttaatag ccaggaacct ggaaacgcgg
781 aggaaatagt gtgctttgcc aggtctaaga atgcaaattt tgacatgttt gagaagattg
841 atgtcaatgg aaaccatgca catccactgt ggaagtactt gaagcacaag caaggaggaa
901 ctctaggaga tttcatcaag tggaatttca ccaagttcat cattgacaag aatggacagc
961 ctgtagagag gcatggtccc aacgttgatc ccagtaaact ggtgtccagc ttggagaagt
1021 actggtaatg tccttcaagg tcaatgatga tggaattttt cttttgaaag ttgtagcagg
1081 gaatttgagg gtgatctcct agtagtgttt cacaagttgc tgaatcatca ttgttgcttc
1141 agcaaggttc agtgtgtaga ctgttatctt gtaatgttgc atagtagatt agttaagatt
1201 gatatttatc tgttattaat gcattcttga gataaaaaca ttatttccaa attaaatatc
1261 acaagcagac caaagaagga gtgtttctga aattcagcat gtcataattt tcattccatt
1321 gtctgtccta ctttgatatg tcttgctgtc taatcgcaga ccacgcaaca cactggttgt
1381 gtttaattcc tttcacagtt aatgtattcc cttcagactg tattttataa gagaatagta
1441 gctgcaccat tgtaaacata ataaatatag tgaacctgtc ataaatggaa aaaaaaaaaa
1501 aaaaaaa
//