LOCUS FX982953 1831 bp mRNA linear TSA 01-APR-2017
DEFINITION TSA: Reticulitermes speratus RsCSP2 mRNA for putative chemosensory
protein, partial cds, contig: comp786165_c0_seq2.
ACCESSION FX982953
VERSION FX982953.1
DBLINK BioProject:PRJDB3531
Sequence Read Archive:DRR030795, DRR030796, DRR030797, DRR030798,
DRR030799, DRR030800, DRR030801, DRR030802, DRR030803, DRR030804,
DRR030805, DRR030806, DRR030807, DRR030808, DRR030809, DRR030810,
DRR030811, DRR030812, DRR030813, DRR030814, DRR030815, DRR030816,
DRR030817, DRR030818, DRR030819, DRR030820, DRR030821, DRR030822,
DRR030823, DRR030824, DRR030825, DRR030826, DRR030827, DRR030828,
DRR030829, DRR030830, DRR030831, DRR030832, DRR030833, DRR030834,
DRR030835, DRR030836, DRR030837, DRR030838, DRR030839, DRR030840,
DRR030841, DRR030842, DRR030843, DRR030844, DRR030845, DRR030846,
DRR030847, DRR030848, DRR030849, DRR030850, DRR030851, DRR030852,
DRR030853, DRR030854
BioSample:SAMD00026264, SAMD00026265, SAMD00026266, SAMD00026267,
SAMD00026268, SAMD00026269, SAMD00026270, SAMD00026271,
SAMD00026272, SAMD00026273, SAMD00026274, SAMD00026275,
SAMD00026276, SAMD00026277, SAMD00026278, SAMD00026279,
SAMD00026280, SAMD00026281, SAMD00026282, SAMD00026283,
SAMD00026284, SAMD00026285, SAMD00026286, SAMD00026287,
SAMD00026288, SAMD00026289, SAMD00026290, SAMD00026291,
SAMD00026292, SAMD00026293, SAMD00026294, SAMD00026295,
SAMD00026296, SAMD00026297, SAMD00026298, SAMD00026299,
SAMD00026300, SAMD00026301, SAMD00026302, SAMD00026303,
SAMD00026304, SAMD00026305, SAMD00026306, SAMD00026307,
SAMD00026308, SAMD00026309, SAMD00026310, SAMD00026311,
SAMD00026312, SAMD00026313, SAMD00026314, SAMD00026315,
SAMD00026316, SAMD00026317, SAMD00026318, SAMD00026319,
SAMD00026320, SAMD00026321, SAMD00026322, SAMD00026323
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Reticulitermes speratus
ORGANISM Reticulitermes speratus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea;
Blattoidea; Termitoidae; Rhinotermitidae; Reticulitermes;
Frontotermes.
REFERENCE 1 (bases 1 to 1831)
AUTHORS Mitaka,Y., Kobayashi,K. and Matsuura,K.
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Kenji Matsuura
Kyoto University, Laboratory of Insect Ecology, Graduate School of
Agriculture; Kitashirakawa Oiwake-cho, Kyoto, Kyoto 606-8502, Japan
REFERENCE 2
AUTHORS Mitaka,Y., Kobayashi,K., Mikheyev,A., Tin,M.M.Y., Watanabe,Y. and
Matsuura,K.
TITLE Caste-Specific and Sex-Specific Expression of Chemoreceptor Genes
in a Termite
JOURNAL PLoS ONE 11, e0146125 (2016)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pone.0146125
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. trinityrnaseq_r2012-04-27
Sequencing Technology :: illumina Hiseq2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1831
/db_xref="taxon:60591"
/mol_type="mRNA"
/note="contig: comp786165_c0_seq2"
/organism="Reticulitermes speratus"
CDS <1..386
/codon_start=3
/gene="RsCSP2"
/product="putative chemosensory protein"
/protein_id="BAU20279.1"
/transl_table=1
/translation="RVHGGVNAVFSLFQAVVLRCALIVACLFIVATLGGPEDERRPKI
SDEALERALNDKRYLQRQLKCALGEASCDSVGRRLKSLAPLVLRGSCPQCTPDELRQI
QRTLSHIQRNYPKEWNKIVKQYAGV"
BASE COUNT 596 a 278 c 351 g 606 t
ORIGIN
1 gcagagtaca tgggggagta aacgcagtgt tttcgttgtt ccaggctgtg gtgttgaggt
61 gtgccctgat agtggcctgc ctgttcatcg ttgcgacgct tgggggccct gaggatgaac
121 gaaggcccaa aatatctgac gaggccctag agagggctct gaacgacaag cgttatcttc
181 agcggcaact aaaatgtgcg ctgggggagg cgtcatgtga ctccgtaggc cgtaggctta
241 aatctcttgc accactcgtc ttgagaggct cttgcccaca gtgcacccct gatgagttgc
301 gccagattca gagaactctc tcccatatcc agcggaatta ccccaaggaa tggaacaaga
361 ttgttaagca gtatgctgga gtttaaaaga gaaacaatac attaagtgat aacagacggt
421 ctgtggaaaa tggtaaataa attttccaga gcattggtgc cactgtaaag acgtgaccat
481 tgagaaaaca ctcatactgg agaagtctgg tttctgaatt ctagtgacag ttctattcgt
541 ggcaaaatta tcacaatgat agaattgatt atattcaaat ttatgtaagt ataatttcat
601 attgttgtgc tttgggatca ctcataattc tttgctgatt ttaaggttta gaaattttta
661 acatttggtt tgcacatatg ttgattagaa tttggaaact tgcttcatgt gaaattaaag
721 aattcatgga gcattaccga cacagtactg aaccaatggg gttcatgtaa tatttgtggt
781 aaatatattt cacgtttata cgttacacta acccaacata agctctttga aatgtattga
841 gataagttca ggtgaattta gtttcacatc ttatgttaag caacctgttg tgttatatta
901 atttagattc attaaactta aaaaattcca ttcaactctt tatccatgtt tcggctacta
961 gagttctatt ttcgcaattt ctttcaaccc agaactgtta aaattatggt tggaagtaga
1021 ttatcagtag tattttaact gataactttc aaaatctgat tgataattca gtgttagttg
1081 gataataaaa tatgttttat tatgagaaaa gttttcaaga cgtttgctat ttctggaact
1141 ttggaatatg gcctcaagga agggtgaaaa gagattgtta tcagaaataa gaagtctttt
1201 gaagttaaaa attgttcaga attagtaaat ggaaatatag tggcataaat ggactctaca
1261 acaacaaaaa atgcagttga aaacactttt acagtattta attgaaaaat taaattagga
1321 agtttatcaa tggaaatgtt tgtcaattaa gttactagaa tagtaattac aaattaaaac
1381 gtcatgtctt tggcattata ttctgatggt tgaagtgaat tgtttgcaac ctgctacacc
1441 tccattcaca gccatgacag ttgtgtgata cactccaata tagacatgta gcttttaata
1501 atattaatct acattttaat gttaaaaata taattgtcat acaacagact ttgaacctgt
1561 ctaaaataaa acattttgat ttgttatcat gaaagtgaat tccaattgat ttgtaatgca
1621 atcattattc attctaactt ctgagtctca aacatataca aaacagtatt aaacatttac
1681 tgacataatt tgtttgtttg gaattgtttg caattctgga tgtcaaactt gttgacttcc
1741 catttggatt agtgattgtt gtgtgtataa gcttaaattg aaaataaagg tgttactttc
1801 agtacatttg cacaaaaaaa aaaaaaaaaa a
//