LOCUS FD168194 790 bp mRNA linear EST 19-MAY-2010 DEFINITION CBZC8782.g1 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M) Ictalurus furcatus cDNA 3' similar to zebrafish RefSeq, NP_998569.1, lipase, gastric [Danio rerio], mRNA sequence. ACCESSION FD168194 VERSION FD168194.1 DBLINK BioSample: SAMN00164690 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 790) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Reverse. FEATURES Location/Qualifiers source 1..790 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164690 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 238 a 155 c 163 g 234 t ORIGIN 1 ttttcttttt tttttttttt ttgctcatga atttttattg ggtttgagtc cattgattta 61 taaagtaagt caaatgatcc ttctaaaaag agaatgcttt ttggacagcc tttagaaaat 121 gtaaaataca atctgacaac gaaggaaaaa agattactct ataattagag gccaaaatcc 181 aacattcaca ttaaacacag cgtttcctat gaaacacaat ggggaaagtc gtgcctgatc 241 aacacatggc tcaataagca catataagaa agcagctttt gtgttaacag catatttact 301 aatcgaataa tgtgttagat gaggtaagaa aaatttgagg taaaacaaaa ccaaacatat 361 ggtctttgcc ataattccct gctaaggaat cgttaaggaa tgcatagtgc tggttgttgt 421 agttataaaa taaacctcca cattaaaagg cataaaaatc agtctcattg ctaagagtta 481 aaaggcggtc agacattctg tctcatcagc atggtcagcg gttcgtacat ctcctgcggg 541 gcgtccaggc cccagatgaa gtccaggtgc tcccagtgct tgatgttgcg atggaacacc 601 aggttaggga tctgtgtgag cagtaatgcc acgtcctttt ggtctgccag cgtgtcgtgt 661 cccccggacc acaccgctgt tggcaccgtc atgtcccgca cgttgtacag aggaggggtt 721 gactgattat aatgagcaat atttccagct tttccgtagt catatgccat caatttccta 781 tactttacag //