LOCUS CK334605 750 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063E12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063E12 3', mRNA sequence. ACCESSION CK334605 VERSION CK334605.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 750) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3063 row: E column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..750 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063E12-3" /db_xref="taxon:10090" /clone="H3063E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 283 a 133 c 106 g 228 t ORIGIN 1 attgaaagtt aaaatttatt aagccatcat gtgccaaata ctcaggttca aattaatttc 61 aaaatatata caggcatgta atgaacttaa aaatgagaaa actggtctgg aaattgcaga 121 gctacaagtg actgatggaa ctgaactgaa aaatctagat catctattac aaactgtttc 181 ccctcggtgc ccaacattca actgattcac aattatctag acctttaaag agaaactttt 241 aataaaaagc acttggcaac cctaacaatt ttttccataa attgaaatga tattaactga 301 atccattgtt ttctacaaat taagttaatt ttaggcaaaa gtgtcctcag tgactaatgc 361 ggttcatcat ttatttaaat gttgaagctc tcatactaag tttttacaag ctggtgaaca 421 ctgacaaact atttctccca cagaactata accacacatt cccagacagt ataaatatat 481 ggttgaacta actttaatac acatcaccat tttatcgatt acataataaa acaaatgatc 541 aagtatccaa ttattaagtt acatagctca aaaggcgtat aaaacatttc tgctcagttc 601 actagcagat ccatcccact ttgtcttttt tgcaagagat tgggaagagg aaagccataa 661 ttcaaacaag ctggaaaact tctgataggt atggaaaaca caaaaatttc agaaattttg 721 attaagaatt ggttagctac aacaatgtat //