LOCUS CK334141 548 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007A11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007A11 5', mRNA sequence. ACCESSION CK334141 VERSION CK334141.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 548) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3007 row: A column: 11 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..548 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007A11-5" /db_xref="taxon:10090" /clone="H3007A11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 167 a 114 c 181 g 86 t ORIGIN 1 gcgaccttca gcgtgtctga ccagatggca gtggatgcgt gggagaagca ggttcgtgaa 61 gaggggaccc cactcaccag atactacggc cactggaaga agctgaggga ccgtgagatc 121 cagctggaaa tcagtggcaa agagcggcta gaagacctga acttcccaga gatcaaaagg 181 cggaaggtgg aagacaggaa ggatgaagac aggaaagaat taaaggacct gtttgagttg 241 gacagttctg agggcgagga cagcaccgac ttctttgaga gaggagtacc taggctccca 301 gaagctcacc aaggactgaa agaagatcag gaagaagaag ataaagaaga aggtgacagc 361 gattcagagg atggagacac agacacggga gtggatctga gcgaactgtg gcagctggct 421 cagggaccac aagatgagct ggaggatctt cagctctcag aagaggactg aggcctcctg 481 ctgcctcctg gaggcctcga cagcaactgt gcggcgagag gacagcagag cgtaaacagg 541 cttttatt //