LOCUS BX640925 4207 bp mRNA linear HUM 28-AUG-2003
DEFINITION Homo sapiens mRNA; cDNA DKFZp686N01252 (from clone DKFZp686N01252).
ACCESSION BX640925
VERSION BX640925.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4207)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686N01252) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4207
/db_xref="H-InvDB:HIT000055471"
/organism="Homo sapiens"
/map="3p25.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686N01252"
/tissue_type="human salivary gland"
/db_xref="taxon:9606"
CDS <1..293
/codon_start=3
/gene="DKFZp686N01252"
/product="hypothetical protein"
/note="FYVE-finger-containing Rab5 effector protein
Rabenosyn-5, N-terminus truncated, differentilly spliced"
/db_xref="H-InvDB:HIT000055471.14"
/db_xref="UniProtKB/TrEMBL:Q6MZR5"
/protein_id="CAE45963.1"
/translation="HPSNLRLQRMIRYSATLFVQEKLLGLMSLPTKEQFEELKKKRKE
EMERKRAVERQAALESQRRLEERQRASHPPCLCFGSRLFPSSKQHSSQDPFT"
regulatory 4174..4179
/regulatory_class="polyA_signal_sequence"
polyA_site 4184
BASE COUNT 1131 a 912 c 1019 g 1145 t
ORIGIN
1 cacatccaag caatttgcgg ctgcagagaa tgatcagata ctcagctaca ctttttgtgc
61 aggaaaagtt gcttggtttg atgtcactgc caaccaaaga acagtttgag gaactgaaaa
121 agaaaaggaa ggaggaaatg gagaggaaga gggccgtgga gagacaagct gccctggagt
181 cccagcgaag gcttgaggaa aggcagagag cctcgcaccc accttgctta tgctttggat
241 ctaggctctt ccccagttcc aagcagcaca gctcccaaga ccccttcact tagctcaact
301 caacccacca gagtgtggtc tgggccccca gccgttggcc aggagcgctt accccagagc
361 agcatgccac agcaacatga ggggccctcc ttaaacccct ttgatgagga agacctctcc
421 agccccatgg aagaggccac tactggtcct cctgctgcag gggtttcctt agacccttca
481 gcccgcatcc tgaaagagta caatcctttc gaggaagagg acgaggagga ggaagcagtg
541 gcagggaatc cattcattca gccagacagc ccagctccta accccttcag tgaggaagac
601 gaacatcccc agcagaggct ctcaagccct ctggttcctg gtaacccctt tgaggaaccc
661 acctgtatca acccctttga gatagacagt gacagtgggc cagaggctga ggagcccata
721 gaggaagagc tcctcctgca gcagatcgat aacatcaagg catacatctt tgatgccaag
781 cagtgcggcc gcctggatga ggtagaggtg ctgacagaga atctgcggga gctgaagcac
841 accctggcca agcagaaggg gggcactgac tgaccagcag tggagagggc acctttgggc
901 ccaggggtct ggcaggagcc agtggagcag gacagagggc aggcaggatg gatggggaag
961 gtggcagggt gagaactcag atgcacacag gtgaggggca ggaatctgct gttttgtgtt
1021 gcgcactttg aggtatttcc actacagttg aataataaaa tagaaactag aacagggaga
1081 atcagcattc agttgctgct tttcctgttt attattacta tcttttgtaa tcggaggttt
1141 accccttttg aagggacttt acatttttac taccgagata taactaaatg cagctctgtt
1201 gggcccaggg cagaaatggc tgctgtgtac ctcttgggtc catttgctac tgcctagtct
1261 tggttcctta tgcagtatta tagggcagcc tttttagagc ccttccttta gccaggacag
1321 agaagataga ttccactgag ctctattctg ctctgacaga agtccatccc tagtaggctg
1381 tgagttccat ttcacctggg gccgcctctc ccctgctctg cacttcctgt ctgtacaata
1441 gaagggggag gtgctgctat gaaggggaga gtttagaccc aggagagccc agcacctctt
1501 tttaaggtgg ggtgatggga atatttcacc agggtctatt ttctcagttt aagttctttt
1561 ttgtctcttt caggaagtta agctcccagt gcagggtatc aatgtgaatc tggtcctgag
1621 ctttttagaa aataagagtg gtggccgggc gcgctggctc acgcctgtaa tcgcaacact
1681 ttggaggctg aggcaggaga atgctgtgaa cccgggaggc agagcttgca gtgagccgag
1741 atcgcaccac tgcactccag cctgggcagt gagagtgaga ctccgtctca aaaaaaaata
1801 agagtggtta actttttggt tgatattagt attatttgtg agaagagttt ccccaccctt
1861 cttctgatag aacaattgtc tgtcactgga gaaatctccc tccagagctt tggcaaagtt
1921 actctgatct gggtctgttt aaaaggccgg gtctctaatt taggaatcgg tgatttggaa
1981 gcttttgcag aacatcacca gaagaaggga agcttcccag agtcagaagc taaattaaaa
2041 taatttccaa ggctatttga tcagccttct tcctttttgg ttcattgtgt cctgacttgg
2101 ggcactgatg agatttttta ttttttttga gacagagttt cactgtgccc gccctgatga
2161 gatattttat taccaatgtt agtattgaga aactgaaatg tttgaagaag cacaacccag
2221 gatcgtgctg gtagcaccac agtacttaaa ctgttggtca attaaggcca gaaagggaaa
2281 ttgttaattt agctctggtg ctttggttta caggaacata actcttaact gacatctgac
2341 atcatgatag ccatatgtgc tcagctctgg gtagagtttc tgcagttact catctgaact
2401 aatgaacaat aactgaccac tagtcacttt atgccgtgta actagctcta ggccatactt
2461 tcactggtta ctggtgtgaa agctgaaatt cattttgtta cattctggtg aagacccctc
2521 ttgataatgg gaatgtttta actctcttga tgaaaaaata atctgtattt gtgttgatgt
2581 tcacatttct gtagcacatt tcttatcctt ttggttgaat gaaaagatct tgtatagggg
2641 tgtggagatg gggagtgggt agaagtgtgt gaaggacgct ttgcatttgg gatctgttca
2701 caaacagcca tatgagtgtg ttaatgaatg tcagccagtt accaaccctg ctggttgtta
2761 tgggttgttt tgagaagttg gcaaccaggc atctaagatg ttgcctggta caggcctctt
2821 ttcttccctg aggcccatga catttctctg ttactctaga gggtttctca gatggccagt
2881 aggctcctcc ctgcttaggg tctcatttct ctgaaaagag gatgaactga aaagcaggta
2941 gttccagaag ctaattgctg ctttccatca taattatttt tcttgtgaga acatttctct
3001 tttaattagc tagtgatttt gattaagact aattcactaa acataccctt ccctcaaatc
3061 acctcaggta gcaatctgta agtaactaaa agcattgaaa aacacacaag aaacaatttt
3121 aaaaactatt tttaaaggcc tggccgggtg cagtggctca ctcctgtaat cccagcactt
3181 tgggaggccg agacgggtgg atcacctgag gtcaggaatt tgagactagc atggccaaca
3241 tggtgaaacc ccgtgtctac taaaaataca aaaattagct gggcgtggtg gcagacgcct
3301 gtaatcccag ctactcaggg aggctgaggc acgagaatcg cttgaacctg ggaggcggag
3361 gttgcagtga gccaagattg cgccactgca ctccaacctg ggtgacaaga gcaagactcc
3421 gtctcacaaa aaacaaacaa aactgactga ttgaatatac taaaccaaac taaaatcata
3481 ttcttttgat taagtttatc catggctgta ttcttctatg aattcttcca tttaattctt
3541 ccacgattat cttctcctgt aaatacatca caggagttag aattctctac ccatcagctg
3601 taccatgtcg cagaattcat gcaggcacaa agttggagtt acagagatgg gttgacagca
3661 ggcaaacttg gcctatgtat tataaccaca acttcaagtt cttacctcat gtgaatattc
3721 accctttctt tagtcttcca aggcaaacag ccccgtctca tcaccagatg agcaaggtct
3781 tgatatggca tagcagatct ccctagacac agatcatgag aaaagatgga agagacttag
3841 ggattcaggc atcagatgaa gttggctttt cccttttatg ccttgtttgt atttaccctg
3901 tctaatacac taaggatact tactcattgt acttgcagct caatatgtct ttgctgttca
3961 gatactaaaa tgtacctctg agtcattgtg agctgtgtgg taggttggac attggcatag
4021 ttggtgatgg gactcaaaat gaaaaggtgg tctctttacc aggtcacaga ctgtagcaga
4081 ttgtgcttgt tatctgacaa tgactgtcac tttgagggtc gttgatttgc atgcactact
4141 ctggggcctt gtattggagc cttttttaaa aaaaataaaa tctgagataa aaaaaaaaaa
4201 aaaaaaa
//