LOCUS BX640837 2624 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686P10213 (from clone DKFZp686P10213).
ACCESSION BX640837
VERSION BX640837.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2624)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686P10213) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686P10213
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2624
/db_xref="H-InvDB:HIT000055385"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686P10213"
/tissue_type="rectum tumor"
/note="down-regulated in adenoma protein, differentially
spliced, alternative start"
/db_xref="taxon:9606"
CDS 260..2215
/codon_start=1
/gene="DKFZp686P10213"
/product="hypothetical protein"
/db_xref="GOA:Q6MZW7"
/db_xref="H-InvDB:HIT000055385.14"
/db_xref="InterPro:IPR001902"
/db_xref="InterPro:IPR002645"
/db_xref="InterPro:IPR011547"
/db_xref="InterPro:IPR018045"
/db_xref="InterPro:IPR030321"
/db_xref="InterPro:IPR036513"
/db_xref="UniProtKB/TrEMBL:Q6MZW7"
/protein_id="CAE45910.1"
/translation="MLLRKIIKRQEDIIRHFWIISKCVVASWLPAYRLKEWLLSDIVS
GISTGIVAVLQGLAFALLVDIPPVYGLYASFFPAIIYLFFGTSRHISVGPFPILSMMV
GLAVSGAVSKAVPDRNATTLGLPNNSNNSSLLDDERVRVAAAASVTVLSGIIQLAFGI
LRIGFVVIYLSESLISGFTTAAAVHVLVSQLKFIFQLTVPSHTDPVSIFKVLYSVFSQ
IEKTNIADLVTALIVLLVVSIVKEINQRFKDKLPVPIPIEFIMTVIAAGVSYGCDFKN
RFKVAVVGDMNPGFQPPITPDVETFQNTVGDCFGIAMVAFAVAFSVASVYSLKYDCPL
DGNQELIALGLGNIVCGVFRGFAGSTALSRSAVQESTGGKTQIAGLIGAIIVLIVVLA
IGFLLAPLQKSVLAALALGNLKGMLMQFAEIGRLWRKDKYDCLIWIMTFIFTIVLGLG
LGLAASVAFQLLTIVFRTQFPKCSTLANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSP
IYFANIGFFRRKLIDAVGFSPLRILRKRNKALRKIRKLQKQGLLQVTPILQEFIRIKV
DVYIVGTDDDFIEKLNRYEFFDGEVKSSIFFLTIHDAVLHILMKKDYSTSKFNPSQEK
DGKIDFTINTNGGLRNRVYEVPVETKF"
BASE COUNT 768 a 508 c 556 g 792 t
ORIGIN
1 ggcacacaga gcctgtagac ctgagtggat ggacactgcc tcttagaact agaacttaga
61 actttatctt gaaaatgtac cactgttgca gaagctcctc acagagtatg tgtcaggcat
121 ttttaacctg ctaaaggcaa gaagaagtgt tcaccacata gttgcaaagg tcttcaactt
181 gccacagcca acagaaaaat caaaatgatt gaaccctttg ggaatcagta tattgtggcc
241 aggccagtgt attctacaaa tgcttttgag gaaaatcata aaaagacagg aagacatcat
301 aagacatttc tggatcatct caaagtgtgt tgtagcatct tggttgccgg cataccggct
361 taaagaatgg ttgctcagtg atattgtttc tggtatcagc acagggattg tggccgtact
421 acaaggttta gcatttgctc tgctggtcga cattccccca gtctatgggt tgtatgcatc
481 ctttttccca gccataatct accttttctt cggcacttcc agacacatat ccgtgggtcc
541 gtttccgatt ctgagtatga tggtgggact agcagtttca ggagcagttt caaaagcagt
601 cccagatcgc aatgcaacta ctttgggatt gcctaacaac tcgaataatt cttcactact
661 ggatgacgag agggtgaggg tggcggcggc ggcatcagtc acagtgcttt ctggaatcat
721 ccagttggct tttgggattc tgcggattgg atttgtagtg atatacctgt ctgagtccct
781 catcagtggc ttcactactg ctgctgctgt tcatgttttg gtttcccaac tcaaattcat
841 ttttcagttg acagtcccgt cacacactga tccagtttca attttcaaag tactatactc
901 tgtattctca caaatagaga agactaatat tgcagacctg gtgacagctc tgattgtcct
961 tttggttgta tccattgtta aagaaataaa tcagcgcttc aaagacaaac ttccagtgcc
1021 cattccaatc gaattcatta tgaccgtgat tgcagcaggt gtatcctacg gctgtgactt
1081 taaaaacagg tttaaagtgg ctgtggttgg ggacatgaat cctggatttc agccccctat
1141 tacacctgac gtggagactt tccaaaacac cgtaggagat tgcttcggca tcgcaatggt
1201 tgcatttgca gtggcctttt cagttgccag cgtctattcc ctcaaatacg attgtccact
1261 tgatggcaat caggagttaa tagccttggg actgggtaac atagtctgtg gagtattcag
1321 aggatttgct gggagtactg ccctctccag atcagcagtt caggagagca caggaggcaa
1381 aacacagatt gctgggctta ttggtgccat catcgtgctg attgtcgttc tagccattgg
1441 atttctcctg gcgcctctac aaaagtccgt cctggcagct ttagcattgg gaaacttaaa
1501 gggaatgctg atgcagtttg ctgaaatagg cagattgtgg cgaaaggaca aatatgattg
1561 tttaatttgg atcatgacct tcatcttcac cattgtcctg ggactcgggt taggcctggc
1621 agctagtgtg gcatttcaac tgctaaccat cgtgttcagg acccaatttc caaaatgcag
1681 cacgctggct aatattggaa gaaccaacat ctataagaat aaaaaagatt attatgatat
1741 gtatgagcca gaaggagtga aaattttcag atgtccatct cctatctact ttgcaaacat
1801 tggtttcttt aggcggaaac ttatcgatgc tgttggcttt agtccacttc gaattctacg
1861 caagcgcaac aaagctttga ggaaaatccg aaaactgcag aagcaaggct tgctacaagt
1921 gacaccaatt ttgcaagaat ttatcaggat caaggtagat gtgtatatcg ttggaactga
1981 tgatgacttc attgagaagc ttaaccggta tgaatttttt gatggtgaag tgaaaagctc
2041 aatatttttc ttaacaatcc atgatgctgt tttgcatatt ttgatgaaga aagattacag
2101 tacttcaaag tttaatccca gtcaggaaaa agatggaaaa attgatttta ccataaatac
2161 aaatggagga ttacgtaatc gggtatatga ggtgccagtt gaaacaaaat tctaatcaac
2221 atataattca gaaggatctt catctgacta tgacataaaa acaactttat acccagaaag
2281 ttattgataa gttcatacat tgtacgaaga gtatttttga cagaatatgt ttcaaacttt
2341 ggaacaagat ggttctagca tggcatattt ttcacatatc tagtatgaaa ttatataagt
2401 attctaaatt ttatatcttg tagctttatc aaagggtgaa aattattttg ttcatacata
2461 tttttgtagc actgacagat ttccatccta gtcactacct tcatgcatag gtttagcagt
2521 atagtggcgc cactgttttg aatctcataa tttatacagg tcatattaat atatttccat
2581 taaaaaatca gttgtacagt ggaaaaaaaa aaaaaaaaaa aaca
//